Shewanella putrefaciens CN-32: Sputcn32_0292
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Entry
Sputcn32_0292 CDS
T00513
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
spc
Shewanella putrefaciens CN-32
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spc03021
]
Sputcn32_0292
Transcription machinery [BR:
spc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Sputcn32_0292
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Fe_dep_repress
UCR_14kD
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
ABP74025
UniProt:
A4Y242
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All DBs
Position
308360..309217
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AA seq
285 aa
AA seq
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MTFQTQSMALTVPQGSSSLEAYIHSVTSISMLDAEAEYELAKRLQETGDLQAAKQLIMSH
LRFVVHVAKGYSGYGLPQADLIQEGNIGLMKAVKRFDPDVGVRLVSFAVHWIKAEIHEYV
LKNWRIVKVATTKAQRKLFFNIRKAKKRLGWFSDEEVTMVAENLGVSKADVTEMESRMAA
QDPAFDLTSDNDDEQDFAPVHYLEDHSSDLAENIENDNWESNAQGRLLSAIKTLDERSQH
ILRARWLDDDKTTLQELAETYQVSAERIRQLEKNAMNKLKACMEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgacctttcaaacgcaatcaatggcactgacagtcccacagggcagtagtagtctagag
gcttatatccattcagtgactagcatcagtatgctggacgctgaggctgagtatgagtta
gccaagcgtttgcaggaaacgggtgatctgcaagcagcgaagcaactgattatgtcgcat
ttacgctttgttgtgcatgttgcaaaaggctattcaggttacggtctgccacaggcggat
ttgatccaagaaggcaatatcggtctaatgaaagcagtaaaacgcttcgatcccgatgtt
ggcgtacgtctggtgtcctttgctgtgcactggatcaaagcagaaattcatgaatatgtg
ctcaaaaactggcgcattgttaaagtcgccaccacgaaagcacaacgtaagttgttcttt
aacatccgtaaagcgaaaaaacgcttaggttggtttagcgatgaagaagtcactatggtg
gctgaaaatttaggtgtatctaaagctgatgtgaccgaaatggaatcacgtatggcagcc
caagatcccgcgtttgatttgaccagtgataatgatgatgaacaggattttgccccagtt
cattatcttgaagatcattcgtcagatttagccgaaaacatcgaaaacgacaactgggaa
tccaatgcccaaggtcgtttattatcggccatcaaaaccttagacgaacgtagccagcat
attctgcgcgcccgttggttagatgacgataaaaccaccctgcaagaattggcagaaacc
tatcaagtctcggctgagcgtattcgccagttagagaaaaacgccatgaacaagcttaag
gcctgtatggaagcctaa
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