Shewanella putrefaciens CN-32: Sputcn32_0922
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Entry
Sputcn32_0922 CDS
T00513
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
spc
Shewanella putrefaciens CN-32
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spc03009
]
Sputcn32_0922
Enzymes [BR:
spc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
Sputcn32_0922
Ribosome biogenesis [BR:
spc03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Sputcn32_0922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ABP74651
UniProt:
A4Y3W8
LinkDB
All DBs
Position
complement(1025836..1026564)
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AA seq
242 aa
AA seq
DB search
MRLAKYLAQCGIGSRREACRLINAGRITLNGKIAKHTNLVQRDAQGLCLDSICLDAEPIV
ETEALAYWIFNKAVGTDCRLLEQDKTSLLHLLPKAPRLYPVGRLDKDSRGLLLLTNDGEL
THKLMHPSFAHSKTYHVRLDKPFTDDFVEQMASGVRYKDLQTLPCQVRRLSLDSFEIVLT
QGLNRQIRHMSKALGYRVIDLERVAIMALNLRELASGELPEGQMRPLTPQETTVLKTALA
TG
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttagcaaaataccttgcccaatgcggcattggctctcgccgtgaagcctgccgt
ttgattaatgctgggcgtattacacttaatggcaagatagccaaacataccaacctagtt
caacgcgatgctcaaggtctatgccttgatagcatttgcttagatgcagagcccatagtt
gaaacagaagcactcgcttattggatattcaataaagctgtcggcaccgattgccgtttg
cttgaacaagataaaacgagcttattgcatctgcttcccaaagcgccaagactctacccc
gtcggcaggctagataaggactcccgcggcctgttactgttaactaacgatggtgagctg
acccataaactgatgcaccccagctttgcccacagtaaaacctaccatgtgcgcctcgat
aagccattcactgatgattttgtagaacaaatggcaagtggagtgcgttataaagatctg
caaaccctgccctgccaagtacgccgcctcagtttggacagctttgaaatcgtgctgact
caaggattaaatcgacaaattcggcatatgtccaaggcactcgggtatcgcgttatcgat
cttgagcgcgtcgctataatggcgctgaatttacgtgaattagcatctggtgagttacca
gaagggcaaatgcggccattaacaccacaggaaaccacagtgcttaaaacggcactggct
acagggtaa
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