Shewanella putrefaciens CN-32: Sputcn32_1050
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Entry
Sputcn32_1050 CDS
T00513
Name
(GenBank) OmpA/MotB domain protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
spc
Shewanella putrefaciens CN-32
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spc02000
]
Sputcn32_1050
Transporters [BR:
spc02000
]
Other transporters
Pores ion channels [TC:
1
]
Sputcn32_1050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OMP_b-brl
OmpA
Autotransporter
OprF
TSP_3
Porin_4
DUF748
YqbF
Motif
Other DBs
NCBI-ProteinID:
ABP74778
UniProt:
A4Y495
LinkDB
All DBs
Position
complement(1173183..1174283)
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AA seq
366 aa
AA seq
DB search
MMKNTLKVVLLTSMLPLAASASQELTPWYVGAGLGVNNYEHIATQNGDDNPYAWDIFAGY
MFNDYFGAEIGYRDLGNADWTTSGISNDADVKGATLGLVGLWPLANRWSLSAEAGAMYYT
LENSQRDTISGARSSYSSDDFAPYFGAGIGYNFTDNLKLQAKYRRYENLDDKYNIVEADS
NYWGLELSYRFGTPVAAAAPVVAAVVAAPVDSDNDGVYDDKDQCPATPATHKVDSVGCTI
YENVKNKEDVGSIQFANDSAVVKNVYYKDIERLANYLNKNPEFTVEIAGHASNVGKPEYN
MVLSDKRADAVANILVEKFGISRSRVTSNGYGITQPLVAGDSKEAHAANRRIEAIVTTTT
KQPVLK
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaatacattaaaagtagttttacttacgtcaatgctcccacttgctgccagt
gcatctcaagaactcacgccttggtatgttggtgcaggtctaggcgttaataactatgaa
cacattgcaactcaaaacggtgatgacaacccatacgcatgggatatatttgccggctat
atgtttaatgactactttggtgcagaaatcggctaccgtgatctaggtaacgctgattgg
accacttcaggcattagcaacgatgctgacgtaaaaggcgcgacacttggtttagttggt
ctttggccattagctaaccgttggagcctatcagctgaagctggagcaatgtattacact
cttgaaaatagccaacgtgatactatttctggtgctcgtagttcatatagctctgacgac
ttcgccccatactttggtgcaggtatcggctacaacttcactgacaacttgaagttacaa
gccaaataccgtcgttatgaaaacttagatgacaaatacaacatcgttgaagcagatagc
aactactggggcctagagcttagctaccgttttggcactccagttgccgccgcagcacca
gttgtagcagccgttgttgctgcacctgtcgactcagacaacgatggtgtatacgacgat
aaagatcaatgtccagcgacaccagcaactcataaagttgactctgtgggctgtaccatt
tatgaaaatgtgaaaaacaaagaagacgtaggttcaatccagtttgctaacgattctgct
gtagttaaaaatgtatactacaaagacatcgaaagactagctaactacttgaacaagaac
cctgaattcacagttgaaattgctggtcatgcctcaaacgtaggtaaaccagaatacaac
atggttctgtctgacaagcgtgctgacgctgttgccaatattcttgtagaaaaatttggt
attagcagaagtcgtgtaacctccaacggttacggtattactcagccgttagttgctggt
gattcgaaagaagctcatgctgcgaaccgtcgcattgaagctatcgttacaaccacaaca
aaacaacctgttctgaagtaa
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