Shewanella putrefaciens CN-32: Sputcn32_1493
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Entry
Sputcn32_1493 CDS
T00513
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
spc
Shewanella putrefaciens CN-32
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spc03032
]
Sputcn32_1493
03036 Chromosome and associated proteins [BR:
spc03036
]
Sputcn32_1493
03400 DNA repair and recombination proteins [BR:
spc03400
]
Sputcn32_1493
DNA replication proteins [BR:
spc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Sputcn32_1493
Chromosome and associated proteins [BR:
spc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Sputcn32_1493
DNA repair and recombination proteins [BR:
spc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Sputcn32_1493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
VWA_3
Lmo2446-like_N
Motif
Other DBs
NCBI-ProteinID:
ABP75218
UniProt:
A4Y5I5
LinkDB
All DBs
Position
1704805..1705077
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIEKIASGADISKAAAGRALDSFIAAVTEGLKEGDKISLVGFGTFEVRERAERTG
RNPQTGEEIKIAAAKIPAFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatctgaactaatcgagaaaattgcttctggtgctgatatttctaaagccgct
gctggccgtgcactggattcttttatcgctgctgtgaccgaaggtctgaaagaaggcgat
aaaatttctcttgttggttttggtacttttgaagtgcgtgagcgcgctgagcgtactggt
cgcaacccacaaacgggtgaagaaatcaaaatcgcagcagcaaaaattcctgcctttaaa
gcaggtaaagctctgaaagacgctgtcaattaa
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