Shewanella putrefaciens CN-32: Sputcn32_1531
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Entry
Sputcn32_1531 CDS
T00513
Name
(GenBank) Exodeoxyribonuclease I subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
spc
Shewanella putrefaciens CN-32
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spc03400
]
Sputcn32_1531
DNA repair and recombination proteins [BR:
spc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sputcn32_1531
Archaeal homologous recombinant proteins
Sputcn32_1531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
DUF3237
Motif
Other DBs
NCBI-ProteinID:
ABP75256
UniProt:
A4Y5M3
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All DBs
Position
1746830..1747975
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AA seq
381 aa
AA seq
DB search
MKFIHTSDWHIGRQLHNQSLLDDQAFVLEQIIALADEHKVDAVIVAGDIYDRSIPPANAV
ALLDDVLNRLVHDLGLQVIMIAGNHDGHERLGFAAKQMAASGLHIIGPLSADIHPITLSS
SSGDVVFYPLPYAEPATVRQVFECEAASHEAAMTLLLEQVRQHDSQGLPKVVISHCFLDG
GSESESERPLSIGGADKISPTLFTEFDYVALGHLHGPQYKGAEHVRYSGSILKYSFSEQH
QHKSVTLVELSAQTPIKIRLLPLTSIRDVRILEGELATLLVQGKTDIKREDYLMVRLLDK
HAILDAMGKLRAVYPNVLHLERTGLMAGQQQVTLSRDHIKKGEMDMFRDFFSQVSGESLT
QAQQAVMDELLTKLHNEERQA
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatccacacctcggactggcacataggtcgtcaattacacaatcaatcacta
ctggatgatcaagcttttgtgctcgagcaaatcattgctttagcggatgaacacaaggtg
gatgccgtgattgtggcgggggatatttatgacagatcgattccgcctgcgaatgcggtt
gcgctgttagatgatgtgcttaaccgcttagtgcatgatttgggcctgcaagtcattatg
attgcgggtaaccacgatggtcacgagcgcttaggttttgcagcaaaacaaatggcggca
agtgggttacatattattgggcctttgagtgctgacattcatcccattactttatcgagt
tcaagcggtgatgtggtgttttatcccttgccctatgccgaacctgccacagtgcgccaa
gtttttgagtgtgaggcggcaagccatgaggccgcaatgacgctattgcttgaacaagta
cgccagcacgatagccaaggtttgccgaaagtggtgataagccattgttttttggatggt
ggtagcgagtcagaatctgagcggccactgagcattggtggcgccgataaaatatcgcca
acgctatttactgagtttgattatgtcgcccttggacatttgcacggaccgcaatacaaa
ggtgcagagcatgtgcgctactcaggatcgattttgaagtattcctttagcgaacaacat
caacataagtcggtgaccttagtcgaacttagcgcgcaaacgccgattaaaattcgttta
ttgccattaacgtcaatacgcgatgtccgcatcttagaaggggagttagccacattactc
gtccaaggtaaaacggatatcaagcgtgaggactaccttatggtcagactccttgataaa
catgctattttagatgctatgggaaaattgagagccgtttaccctaatgtgctgcattta
gaacgaactggtctgatggcggggcagcaacaagttaccttgagccgagatcatatcaaa
aaaggcgagatggacatgttccgtgactttttctctcaagtatccggcgagtcattaaca
caagcgcagcaagctgtaatggatgaactcctgactaagctacacaatgaggagcgccaa
gcatga
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