Shewanella putrefaciens CN-32: Sputcn32_1780
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Entry
Sputcn32_1780 CDS
T00513
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
spc
Shewanella putrefaciens CN-32
Pathway
spc03030
DNA replication
spc03430
Mismatch repair
spc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sputcn32_1780
03430 Mismatch repair
Sputcn32_1780
03440 Homologous recombination
Sputcn32_1780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spc03032
]
Sputcn32_1780
03400 DNA repair and recombination proteins [BR:
spc03400
]
Sputcn32_1780
Enzymes [BR:
spc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sputcn32_1780
DNA replication proteins [BR:
spc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sputcn32_1780
DNA repair and recombination proteins [BR:
spc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sputcn32_1780
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ABP75505
UniProt:
A4Y6C2
LinkDB
All DBs
Position
2026029..2026757
Genome browser
AA seq
242 aa
AA seq
DB search
MNIISNASRQIVLDTETTGMNQGSGAVYLGHRIIEIGCVEVINRRLTGRYFHQYINPGQA
IDPEAIAVHGITDERVANEPRFHQIAQQFIEFIDGAEIVAHNANFDVSFMDHEFSMLPSK
GPKTMDICDILDTLEIAKFLHPGQKNNLDALCKRYGIDNSRRHYHGALLDAEILADVYLI
MTGGQTKFNLSNEEVGQEAGGIQRFAPNSLNLKVISASADELAMHEQRLDLVAKSGKCLW
RG
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgaatattatttcaaacgccagccgccagattgtgttggatacagaaactacaggtatg
aatcaaggcagcggtgcagtctatttgggtcatagaattattgaaattggctgtgtggag
gttatcaatcgtcggctgactgggcgttactttcatcaatatatcaatccaggacaggcc
attgatcctgaagcgatagctgtccacggtattaccgatgagcgagttgcaaacgaacca
cgttttcaccaaatagcacagcaatttattgaatttattgatggtgctgaaatcgtagcc
cacaacgcaaacttcgacgtgagctttatggatcacgagttttcgatgttgccttctaaa
ggcccgaaaacgatggatatctgcgatattctcgatactttagaaatagctaaattttta
catccggggcaaaaaaataaccttgatgccctgtgtaagcgatatggtattgataactcg
cgtcgtcactatcacggcgcattactcgatgccgagatccttgctgatgtttatctgatc
atgacgggtgggcaaacgaagtttaatttatctaacgaagaagtaggacaggaagcaggg
gggatccagcggtttgctcccaattcacttaatcttaaagtgatctcagcatcggccgat
gaactagctatgcacgaacaacgccttgatttagtcgcaaaatcgggaaaatgcctctgg
agaggataa
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