Shewanella putrefaciens CN-32: Sputcn32_1852
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Entry
Sputcn32_1852 CDS
T00513
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
spc
Shewanella putrefaciens CN-32
Pathway
spc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Sputcn32_1852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spc03400
]
Sputcn32_1852
DNA repair and recombination proteins [BR:
spc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sputcn32_1852
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Sputcn32_1852
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
UB2H
HEM4
DUF2963
Ish1
DUF724
Motif
Other DBs
NCBI-ProteinID:
ABP75575
UniProt:
A4Y6J2
LinkDB
All DBs
Position
2118525..2120531
Genome browser
AA seq
668 aa
AA seq
DB search
MSESVFQLESQFAPAGDQPAAITKLVDGLESGLACQTLLGVTGSGKTFTIANVIAKLGRP
TIIMAPNKTLAAQLYGEMKEFFPHNAVEYFVSYYDYYQPEAYVPASNTFIEKDASVNAHI
EQMRLSATKALLERKDVVLIASVSAIYGLGDPDSYLKMLLHLRQGDSLGQRDMLQRLSEL
QYTRNDIELQRGTFRVRGEVIDIFPADSDRYAIRVELFDDEIERLSEFDPLTGQIIKRIA
RTTVYPKTHYVTPREKILEATELIKEELRERKQYLLDNNKLIEAQRIHERVQYDVEMMVE
LGYCSGIENYSRYLSGRAPGEGPPTLLDYLPADGLLIIDESHVTVPQIGAMYKGDRSRKT
TLVEYGFRLPSALDNRPLKFEEFEQLMPQTIYVSATPSLYELEKSEGEIAEQVVRPTGLL
DPELEVRPVATQVDDLLSEIAKRVAVNERVLVTTLTKRMSEDLTEYLDEHGVKVRYLHSD
IDTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVCILDADKEGFLRSERSLIQTI
GRAARNVNGKVILYADRITNSMAKAMEETDRRREKQRAHNLKNGIVPKGVVKRITDVMDV
DDGRDSKAVYGKVAEPKSHYHKADAAELSHQIDQLEKKMHEHARNLEFEQAAAMRDEVKH
LRELLIKA
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagaatctgtttttcagcttgaatcgcaatttgctcccgctggcgatcagcctgcg
gccattacaaagttagttgatggtttagagtcgggacttgcctgccaaaccttacttggg
gtcacgggatcgggtaagacgtttacgattgccaatgtcattgccaaattaggacggcca
accattattatggcgcccaataaaaccttggcagcgcagctttatggcgagatgaaagag
tttttcccccataatgcggttgagtattttgtctcttactatgattactaccagcctgaa
gcctatgtgcccgcatcaaatacttttattgaaaaggatgcctctgttaatgctcacatt
gaacagatgcgtttgtcggccacaaaagccttattagaacgtaaagatgtagtgctgatt
gcctctgtgtcggctatttatggtttgggtgatcccgattcctacttgaaaatgttgttg
catctacgccaaggtgacagtttgggacaacgcgatatgttacagcgtcttagtgagctg
caatatacgcgtaatgatattgaattgcagcgcggtacgtttcgcgtgcgtggtgaagtg
attgatatttttccagcagattctgatcgttatgcaattcgggttgagctgtttgatgat
gaaattgagcgtttaagtgaattcgaccctttaacggggcaaattatcaaacgtattgca
cgtacaaccgtttaccctaagactcactatgtcacgccaagggaaaaaatccttgaggca
accgagttaattaaggaggaattgcgggagcgtaaacaatatctactggataataataaa
ctgatcgaagcccagcggatccatgagcgggtgcaatacgatgtggagatgatggtcgaa
ttgggctactgctctggtattgaaaactactcgcgctatttgtctggccgcgcaccgggg
gaagggccaccaaccttgctcgactacttacctgccgatggtttactcattattgatgag
tcccatgtgactgtgccgcaaattggcgctatgtataaaggcgatcgttcccgtaaaacc
accttagtggaatatggctttagattaccatcggcattagataatcggccgctcaaattt
gaagagtttgagcagttaatgccgcaaacgatttatgtgtcggcgacgcctagcctctat
gagctggaaaagagtgaaggagagatagctgaacaagttgtccggcccacaggattgctc
gatcccgagctggaagtacgccctgtggcgacacaggtcgatgatttattatctgaaata
gccaaacgtgtcgcggtcaatgagcgggtgttagtcaccacactaacaaagcgcatgtcg
gaggatttgactgaatacctcgacgaacatggggtaaaagtgcgttatctgcattcggac
atagacacagttgaacgggttgagatcatccgcgatctgcgcttaggtaagtttgatgtg
ttggtcggcatcaacctattacgtgagggcttagatatgccagaagtgtcattggtgtgt
attttagacgctgataaagagggcttcttgcgctctgaacgctcgcttatccaaaccatt
ggccgcgctgcacgtaacgtcaatggtaaagtgatcctctatgccgatcgcatcactaat
tcaatggctaaagcgatggaggaaactgaccgtcgccgcgagaagcaacgtgctcataat
ttgaaaaacggtatagtccccaaaggcgtcgttaagcgtattaccgatgtgatggatgtg
gatgatggccgcgacagtaaagctgtgtatggcaaagtggctgagcctaagtcccattac
cataaagccgatgcggcagagttgagccatcaaatcgatcaactagagaaaaagatgcac
gaacatgcgcgcaatttagagtttgaacaagcggcggcaatgcgtgatgaagtaaaacat
ctgcgtgaattgttgatcaaagcgtag
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