Shewanella putrefaciens CN-32: Sputcn32_1922
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Entry
Sputcn32_1922 CDS
T00513
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
spc
Shewanella putrefaciens CN-32
Pathway
spc00730
Thiamine metabolism
spc01100
Metabolic pathways
spc01240
Biosynthesis of cofactors
Module
spc_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Sputcn32_1922
Enzymes [BR:
spc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Sputcn32_1922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ABP75645
UniProt:
A4Y6R2
LinkDB
All DBs
Position
2202079..2204217
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AA seq
712 aa
AA seq
DB search
MSSSNQNLAIAANAIDITAPESTIPNKSKVPNKSAESSQSTVPKAPSRREIRAQAQAFID
TLAPLQHTNSQKVYLEGSSADIRVGMRQILQTDTLVGGTDDAPIMEKNPPIRVYDCAGPY
SDPEADINVRLGLVKLRQNWILARKDTEQLPCATSDFTQQRLADDGLDHLRFEAGSSAIV
RPRRALQGKRVSQLHYARQGIITPEMEYVAIRENMALAEVQDEILNRKAKGEAFGALVGE
PITAEFVRAEVARGRAIIPLNINHPEAEPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKL
VWSTRWGADTVMDLSTGRYIHETREWIIRNSPVPIGTVPIYQALEKVNGVAEDLTWEVFR
DTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSIMAKWCLSHHKENFLYSHF
REICELCVAYDVSLSLGDGMRPGSIADANDAAQFAELETLGELVKIAWEYDVQTIIEGPG
HIPMQLIKENMDKQLAHCGEAPFYTLGPQITDIAPGYDHFTSGIGAAMIAWYGCAMLCYV
TPKEHLGLPNKQDVKQGLIAYKIAAHAADVAKGHPSAQIRDNALAKARFEFRWEDQYNLG
LDPETARAYHDESLPQESAKVAHFCSMCGPKFCSMKITQDVRAYAAGLEAAQTKAEQVEA
AAQAMQVTIKTPQELEAAMALKSAQFAASGAEIYQVIDKHVKDKLVAEAEEA
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtccagttcaaatcaaaacctagctatagctgccaatgcgatagacatcacagcgcca
gaatcgacaatccctaataaatcgaaagtgcctaataaatcggctgagtctagtcaatca
acagtgcctaaggcaccgagtcgccgagaaatccgcgcgcaggcccaagcctttatcgat
acgttagcgccgctgcaacatactaattcacaaaaggtttatcttgaaggttccagtgcc
gatattcgcgttggtatgcgacaaattctgcagactgacacccttgtcggcggtacagat
gatgcgcctatcatggaaaaaaatccgccaatccgcgtgtacgattgcgccggaccttat
tccgatcctgaggccgatatcaatgtgcgtctaggccttgttaaattaagacaaaactgg
attctagcccgcaaggatacagagcaattaccctgtgccacctcagactttacccaacaa
agactcgccgatgatggtttagatcatctgcgttttgaggcgggttcgagtgccattgtc
cgcccacgcagagcgctgcagggtaaacgagtcagtcaattacactatgcccgtcaaggg
attatcacgcccgaaatggaatatgtggcgatccgcgagaatatggcactcgccgaagta
caggatgaaatcctcaatcgtaaagccaagggcgaagcctttggtgccttagttggtgaa
ccgattaccgccgaatttgtccgcgccgaagttgcccgtggccgcgcgattattccgctg
aatattaaccatcccgaagcagaacctatgattatcgggcgtaattttctggtgaaagtg
aacgccaatatcggtaactcggcagtgacgtcttccatcgaggaagaagtagaaaagctc
gtctggtcaacccgttggggcgcagatacggtaatggatttatccacgggtcgttatatc
cacgaaacccgcgagtggatcatccgcaactcgccagtgcccatcggcacagtgccgatt
tatcaagcgctggagaaagtgaacggcgtagcagaggatttaacctgggaagtgtttcgc
gataccttgattgaacaagcggagcaaggtgttgattactttactattcatgctggtgta
ctgcttcgttacgtgccgatgacggctaaacgtgtcactgggattgtctcccgcggcggt
tcgattatggccaaatggtgcctgagtcaccacaaagaaaatttcctctatagccatttt
cgtgagatctgtgagctttgcgtcgcttacgatgtatccctgtctttaggtgatggtatg
cgtcccggatcgattgccgacgctaatgatgcagcccagtttgcagagcttgaaacctta
ggggaactagtcaaaatcgcctgggaatacgacgtacaaaccattatcgaagggccggga
catatcccgatgcagctcattaaagagaacatggacaagcagttagctcactgcggcgaa
gcgccgttttacacccttggcccacaaatcaccgacattgcacctgggtatgatcatttt
acctccggcataggcgcggccatgatcgcttggtacggctgcgctatgttgtgttatgtc
acgccaaaagaacacttaggattaccgaataaacaagatgttaagcaaggtttgattgct
tataagattgccgcccacgcggccgatgtggcgaaaggtcatccgagtgcgcaaattcgt
gataatgcgctggcaaaggcgcggttcgaattccgctgggaagatcaatataacttagga
ctcgatcctgaaaccgcacgtgcttatcacgatgaatctttaccgcaggaatccgctaaa
gtcgcgcatttttgctctatgtgcggccctaaattttgttcgatgaaaatcacccaagat
gtgcgcgcctatgccgcaggtttagaggcggcacaaacgaaggcagagcaagttgaagcg
gctgcccaagccatgcaagtcactatcaagacgccgcaggagttggaagcggccatggca
ctaaaatcggcacaatttgccgcttcgggcgccgagatttatcaggtgatagacaagcat
gtaaaagacaagctcgtcgccgaagctgaggaagcctaa
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