Shewanella putrefaciens CN-32: Sputcn32_2083
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Entry
Sputcn32_2083 CDS
T00513
Name
(GenBank) two component transcriptional regulator, winged helix family
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
spc
Shewanella putrefaciens CN-32
Pathway
spc02020
Two-component system
spc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Sputcn32_2083
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sputcn32_2083
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
spc02022
]
Sputcn32_2083
Two-component system [BR:
spc02022
]
OmpR family
QseC-QseB (quorum sensing)
Sputcn32_2083
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
Motif
Other DBs
NCBI-ProteinID:
ABP75804
LinkDB
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Position
complement(2386795..2387454)
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AA seq
219 aa
AA seq
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MRIMLVEDNELLAQGICLSLAKLGMQVDHLNSYQQALQGVKNETFSAIVLDLGLPDGNGK
DLLKAWRQQGISIPTIVLTANTNFDTKLECLDMGADDYLGKPFDVRELAARIRAIVRRQY
GLDHNSLIVGALCIDLNTRDVTFREQNIQLSRREFQLLLELAQSAGRVLTRGQLEQLTYG
WDEVGSNSIEVHIHHLRKKLANELIKTVRGIGYTLIEMH
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattatgttagttgaagataatgaattacttgcacagggtatttgccttagtttg
gcaaagctgggtatgcaagttgatcatctcaacagttatcaacaagccttacaaggcgtt
aaaaatgagacctttagcgcaatcgttctcgatcttgggttacccgatggcaatggaaaa
gatcttctaaaagcttggcgtcaacaggggatctcaatcccaacgatagtgcttaccgct
aataccaatttcgacactaaacttgagtgtctggatatgggagccgatgattatttaggc
aaaccttttgatgtcagagaattggccgcacgtattcgagcgatagtaagacgtcagtat
ggattagatcataacagtttgatagtgggggctttatgtattgatttaaacacccgtgat
gtgacttttagagagcaaaacattcagctttcaaggcgagagtttcaacttttgttggaa
ctagcacaatcggcagggcgagtattgactcgtggtcagttggaacaattgacctatggt
tgggatgaggttggcagtaattcaattgaagtgcatattcaccatttacgtaaaaaactc
gctaatgaactgataaaaacggtccgtggtattggttataccctgattgaaatgcactaa
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