Shewanella putrefaciens CN-32: Sputcn32_2110
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Entry
Sputcn32_2110 CDS
T00513
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
spc
Shewanella putrefaciens CN-32
Pathway
spc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Sputcn32_2110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spc03400
]
Sputcn32_2110
Enzymes [BR:
spc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Sputcn32_2110
DNA repair and recombination proteins [BR:
spc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sputcn32_2110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ABP75831
UniProt:
A4Y798
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All DBs
Position
2421269..2424949
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AA seq
1226 aa
AA seq
DB search
MLKLIQSNQMEVLCAHLAAYLRQSVPNTRLLRSEHILVQSPGMSTWLRLEIAKQNGIAAA
LEFPLPSSFTWQLCHHLLPNVPKENAFTKAAMTWKLMQLLPRLLADDAFGPLRHYLGDLS
LHTLGNINGLDELAHQRPADDIKLYQLCGRIADIFDQYLVYRPDWMLAWEQNQHPTTLNK
PLNEDQRWQPILWRALVAFNRDELNQSHYHRANLHSALIEALNDPNTSLTPLPQRLFVFG
ISSMAPQTLEVLYHLASRIDVIILSLSPCQHYWGDIIDPRHRARMAVQYAGKRQLAEQWE
DKLEVGNPLLANNGKMGRELLDMLLELPAEHCDFGDDVYCEPCDDPNDPASHASMLHGVQ
YDILEMQTLDSVLGPDAALYQNIAARRILKKDDESILVKSCHSPLREVETLHDHLLDMLS
RHPQLSPKDIVVMMPDVAAYAPYIDAVFAAKQGLHYIPYAIADRGAAQESPLINSFLNLL
GINQSRFGLTDILSILEVPAILRRFQLDDDELQLIRRWLDEAGVRWGRDQQSRLKQGVPA
FEQNSWAFGIKRLILGYALSDDAPLYQDHLVVTGIEGQSAQALGKLLNFIEALDETQQIL
EKPQTGAVRLMELTTLLDAFYDTDEDEREQLQDIRDAIATLEQELLSAGKPIEALSTAQA
DIATSLTLSIEVLQQWFNQRLTESRVGQRYLAGSVNFCTLMPMRSIPFKLVCLLGMNDGV
YPRVQHPVGFDLMAHFGPRKGDRSRRLDDRYLFLEALLSAREQLYISYIGRSERDNSERI
ASMLVSELIEYCQLCYLPEDLSPQLATISNSEEVEKALLNEIVSQQPLQPFDPKLYQAET
AGTKGIKQSYSQQWCPPNTRTDNGRFIDEFTRIVVENEITQAAIIEEEHLDISALIRFFR
NPAQYFFNRTLKVDLSLNIQADDNDEPFSLNALERYMLQVQLLDNSISQGVLEPDIELLK
RLKASGNLPMHPFDDLLLRQYQQDIKPLIGRTLFLKGEQQSHHADIRLSFDLAISPTTQP
SKTRRVWLEGRIDDISPKGLINYRPGSAHGRDILRLYLRHLCLMAMGYDHASYLLDMGHF
HALSPITPEHAHQLLTDLLQLFYQGQQHPLCFMPRTALAYASSEGEHAERLNEAQAEWLD
EQGEIGEGTEPHYQRLFQFPQDFTENTFGVLADRIYRPMVSLYVKDTLAQLEDFALNNGM
NLGSVNLDPAADINSVSTQQHISRGE
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagttaatccagtctaatcaaatggaagtactctgtgcccatttagccgcttac
cttcgccagagtgtccccaatacacgcctattacgcagtgagcatattctggtacaaagc
cccggtatgtcgacttggttacgtcttgaaattgcaaagcaaaatggtattgcagcagca
ctcgaatttcctctgccctccagttttacatggcagttgtgccaccatttattacctaat
gtcccgaaggaaaatgccttcactaaggctgcaatgacctggaaactcatgcagttattg
ccccgtctgttagcggatgatgcctttgggccacttaggcactatttaggtgatttaagt
ttacatacgttaggtaacataaatggattggatgaattggctcatcagcgtcctgccgat
gatatcaagctgtatcagttgtgcggtcgtattgccgatattttcgatcaatatttagtg
tatcgccccgactggatgttagcttgggagcaaaaccagcaccctacaacgctcaacaaa
ccgctcaatgaagaccaacgctggcagcctattttatggcgcgccttagttgcctttaat
cgagatgaactcaatcaaagccattatcacagggcaaacctacacagcgcattgattgaa
gcgctcaatgatcccaatacctcactaaccccgttgcctcaacggctctttgtatttggt
atttcatcaatggcgcctcaaacccttgaagtgctttatcatttagcaagccgtattgat
gtgattatcttgagtttgagtccatgccagcattattggggtgatattatcgatccacgt
caccgtgcacgcatggcggtgcaatacgcaggcaagcgccaattagcagagcaatgggaa
gataaacttgaggttggtaatcctctgttagcaaacaatggcaagatggggcgtgagtta
ctcgatatgttgcttgagcttcccgccgagcattgtgattttggtgatgatgtttactgt
gaaccttgcgatgaccctaatgatcctgccagtcacgccagtatgctccacggggtgcaa
tacgatattttagagatgcagaccttagatagcgtacttgggcctgatgctgcgctttac
caaaatatcgcagcacgccgcatacttaaaaaagatgacgagtcaatactcgttaagagc
tgccatagcccactgcgagaagtcgagaccctacacgatcaccttctcgatatgttaagt
cgccatccccaattgtcccccaaagatattgtcgtgatgatgcccgatgtcgccgcctat
gcgccttatatcgatgctgtgttcgcagccaaacagggcctgcattatattccctatgcc
atcgcggatcgcggcgcggcacaagaatcacctcttattaatagttttttgaatttactt
gggattaatcaaagtcgtttcggcttgaccgatatcctcagcatcctcgaagtacccgcc
attttgcgccgttttcagcttgatgacgatgaattacaactgatccgccgctggcttgat
gaagctggcgttcgttgggggcgagatcaacaaagtcgcctaaaacaaggtgtacccgca
tttgagcaaaactcttgggcctttggcataaaacgactgatcttaggttatgccttaagt
gacgatgcgccgctctatcaagatcatttagtggttaccggcatagaaggacaatcggca
caagcactcggtaaactgctcaactttatcgaagcactcgatgaaacccaacaaatactc
gaaaagccccaaacgggcgccgtgcgtttaatggaattaacgacattattagatgccttt
tacgacacagatgaagacgagcgcgagcagttacaagatatccgcgatgccattgccacc
ctagaacaagagctattatccgcaggaaaaccgatcgaggcactatcaacagcccaagcc
gatatcgccacgtcgctaaccttaagcatcgaagtattacagcaatggtttaatcagcgt
ttaacggaatcccgcgttggtcaacgctatcttgcaggcagtgtcaacttttgtaccctt
atgcccatgcgttccattccctttaagcttgtctgtttgctcgggatgaatgacggggta
tatccaagagtgcaacacccagtcggttttgaccttatggcccactttgggccgcgtaaa
ggtgatcgctcccgccgtcttgatgatagatatctgtttttagaagccctactctcagcg
cgcgagcagttatatatcagctacattggtcgcagtgaaagggacaactcggagcgtatc
gcctcgatgcttgtttctgaactgattgaatattgtcagctttgttatctgcctgaagat
ctatcgccgcagcttgccactatcagtaacagtgaagaggtagaaaaagccctgctcaat
gagattgtcagtcaacagccattgcaaccctttgatcctaagttgtaccaagccgaaacg
gcgggcacaaaagggatcaagcaaagttacagccaacaatggtgtccacccaatactcga
acggataatggtcgttttatcgatgaattcactcggatagtggtcgagaatgaaatcaca
caggccgctattattgaagaagaacatctggatatttcagccttgatccgcttctttcgt
aatccggcacaatacttctttaaccgtacactcaaggttgatttaagccttaatattcaa
gctgatgacaatgacgaaccctttagcttgaatgcccttgaacgctatatgttacaagta
caactactcgacaatagcataagccaaggtgtgttagaaccggacattgagcttttaaaa
cgcctaaaagccagtggtaacttgcccatgcatccctttgacgacctactgctacgccaa
tatcagcaggacattaaaccgcttattggcaggaccttattccttaaaggcgagcagcag
agccatcatgcagacattagacttagcttcgatttagcgatttcacccacaactcagccc
agtaaaacgcgcagagtatggcttgaaggtcgcattgatgatattagccctaagggactc
atcaattaccgccctggcagtgcccatggtcgcgatatactgaggctgtatttacgccac
ctgtgccttatggcgatggggtatgaccatgctagctatctattggatatgggacatttt
catgcgctttcgcccatcacgccagagcacgcccaccagctattgactgatttactgcaa
ctcttttatcaaggtcaacagcatcccctgtgttttatgccacgcaccgcccttgcttac
gcgagcagtgaaggcgaacatgctgaaagactcaatgaggcacaggctgaatggctagat
gaacaaggagaaataggtgaaggtacagagccccattatcaacggctattccaattccca
caggattttactgaaaacacctttggcgtactcgccgaccgtatttatcgccccatggtc
agtttatacgtgaaagacacgctggctcagcttgaggactttgccctcaataatggcatg
aacctcggaagtgttaacttagatccagcggccgacatcaatagcgttagcacacaacag
catatctcacggggagaataa
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