Shewanella putrefaciens CN-32: Sputcn32_2350
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Entry
Sputcn32_2350 CDS
T00513
Name
(GenBank) type III restriction enzyme, res subunit
KO
K19789
DNA repair protein RadD
Organism
spc
Shewanella putrefaciens CN-32
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spc03400
]
Sputcn32_2350
DNA repair and recombination proteins [BR:
spc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
Sputcn32_2350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_30
DUF7577
AAA_22
T1R_D3-like
Helicase_C_2
AAA_16
Zn_ribbon_3
SLFN-g3_helicase
DZR
zf-tcix
AAA
ERCC3_RAD25_C
UPF0547
Cas3-like_C_2
SNF2-rel_dom
DZR_2
Motif
Other DBs
NCBI-ProteinID:
ABP76071
UniProt:
A4Y7Y8
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All DBs
Position
2708918..2710726
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AA seq
602 aa
AA seq
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MTVLNLSPHFGRYRSFISVPVNLRDYQQQAVDAAIQHFKQSTASAVLVLPTGAGKSIVIA
ELARIAKGRVLVLTHVKELVAQNAEKVGLLTTEASIYAAGLNQKATDGKTVVASIQSAAR
GLSQFDQPFSLVIIDECHRVSLEKTSQYQQVLKHLRTKNPQLRLLGLTATPYRLGTGWIY
QQHYHGKVGSPEHAVFEHCVFELPIRPLIKQGYLTAPTLFDGLSAQYDFSQLKANENGEY
AEAEVNDLLGHYGRATTAIVKQLIELSQHRKGIIIFAATVRHANEIFNLLNQTHAAQSAM
ITAQTHDNERDATIERFKAQELKFLVNVAVLTTGFDAPHVDLIAILRPTASVSLFQQMIG
RGLRIAEGKKDCLIIDYAANGYDLYFPEVGQAKPNSKSVPVQVHCPVCDFANIFWGLTDD
DGDIIEHFGRRCQGIVEPQGKKQQCDFRFRSKSCPDCGEENDIAARICQHCQSTLIDPDK
RLRQVLSQQHHHLFRCQHMSLIDDDDNLKVQYLDIDGNEFNRRFKLQTPAQWRALYALFI
FPHSRTPGLKPKKYTKVTELINDADKFRMPDLLLLKKHKKGWDLLESYFDYQGRYQTENK
LG
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgctaaacttgtcgcctcattttggtcgatatagatcttttatcagcgtgcca
gttaacctccgagactatcaacagcaagcagtcgatgctgccatacaacattttaagcaa
agcaccgcttcagccgtactcgtcttgcctactggtgccggcaaaagtatcgtcatcgct
gaactggcacgtattgctaaaggtcgagtgctagtacttactcatgtgaaagaattggtt
gcacaaaatgcagagaaagtcggtttactgacaaccgaagccagtatttatgcggcggga
ctcaatcaaaaagccaccgacggaaaaaccgtcgttgccagtattcaatcggcagcgcgg
ggattatcgcagttcgatcaaccattctcgttagtcattattgatgaatgccacagagtc
agcctagaaaaaaccagccaatatcagcaagtactcaagcatttacgcacgaaaaatccc
caattaagattgctcggtctcaccgccacaccctatcgccttggcactggctggatttat
cagcaacactatcacggcaaagtggggtctcccgaacatgccgtgtttgaacattgtgtg
ttcgagctgcccatcaggccactcattaaacaaggttacctcacagcgcctacgctattc
gacggcctcagtgcccagtacgatttcagccaacttaaagccaatgagaatggcgaatat
gccgaagctgaggttaatgatttgctggggcattacggccgcgcgaccacagcgattgtg
aaacaactcattgaactgagccaacatagaaaaggcattatcatttttgcggcaacggtg
cgccacgccaatgagatttttaatttactcaaccagactcacgcagcacagagcgccatg
atcacagcacaaacgcacgacaatgaacgtgacgcgacgattgaacgctttaaagcccaa
gagcttaagtttttagtcaacgtagcagtgctaacgacaggcttcgacgcgccccatgtg
gatttaattgcgattttgcggccgactgcctcagtgagtctgtttcaacaaatgatcggc
cgtggattgcgaatcgctgaaggcaaaaaagattgtcttatcatcgactatgctgccaat
ggttatgacttgtatttccccgaggtcggccaagcgaaacccaacagtaaatcggtaccc
gtgcaagtgcattgccctgtgtgcgattttgccaatatattctggggactcacggacgac
gatggcgacattatcgaacactttggtcgccgctgtcagggtatcgtcgaaccgcaaggt
aaaaagcagcagtgcgactttcgctttagatctaaatcttgccccgattgcggagaagag
aatgatatcgcggcgcgcatttgccagcactgccaatcgaccctcatcgatcccgataaa
cgcctgcgccaagtgctcagccagcagcaccatcatttattccgctgccagcatatgagc
ctcatcgacgatgacgacaatctgaaagtgcagtacctcgatatcgacggtaatgaattc
aatcgccgctttaaattgcaaacgccggcccagtggcgagccctatatgccttattcatc
tttccccatagccgtacaccagggttaaaaccgaaaaagtacactaaggtgacagagtta
atcaacgacgcggataaattccgcatgcccgatctcttgctgctgaagaaacataaaaaa
ggctgggatctgctcgaaagctattttgattatcaaggtcgctatcaaactgaaaataaa
ctcggctga
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