KEGG   Shewanella putrefaciens CN-32: Sputcn32_2504
Entry
Sputcn32_2504     CDS       T00513                                 
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
spc  Shewanella putrefaciens CN-32
Pathway
spc02020  Two-component system
Brite
KEGG Orthology (KO) [BR:spc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Sputcn32_2504
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:spc02022]
    Sputcn32_2504
Two-component system [BR:spc02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   Sputcn32_2504
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 HTH_8 AAA_2 AAA_7 FleQ AAA_3 AAA_16 AAA Mg_chelatase HTH_50 ATPase
Other DBs
NCBI-ProteinID: ABP76225
UniProt: A4Y8E2
LinkDB
Position
2909638..2911017
AA seq 459 aa
MNAPNSIQDYSVLIIDDEPHIGTVLVQLFELEGIKAITRTEPKDIAKLLDKDWAGVVISD
VNMPQLDGISLMQQIRQQDPDLPVVLLTGFGDIAMAVNALKQGAYDFLEKPFNNEHMLDV
VKRALDKRSLTLENRKLKKELESQSVPGPRILGHSVGINRMRHIIEQVINTPADVLIEGE
TGTGKELVARYLHDHSNRNQANFVAINCGAIPENLIESELFGAEAGAFTGVDKMRVGKFE
YANGGTLFLDEIESTPLSLQVKLLRVLEDRKVERLGSNKSINLDIRVIAATKVDLKSLCD
TGEFRQDLLYRLNLVTVPIPPLRDRREDIPLLFLHFARVASARYHKALIALNAEQNAILT
SHDWPGNVRELRNLAERYVLLGGEAAFAGSLGNTPSLHSSMSLLQRVEFFERVLIEEALS
HNKGSIKLTMEQLELPRKTLYDKMRKYDLDRKQYVNSED
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgaatgcgcccaattcaatccaagactattcagtacttatcatcgatgatgagccacat
ataggcaccgtcttagtgcaattgttcgaactagaaggtattaaagccatcactcgcact
gaacctaaagatattgccaaactgcttgataaagattgggccggagtagtgatctccgat
gtgaatatgccacagcttgatggcattagtcttatgcaacaaattcgccagcaagatcct
gatttacctgtagtcctactcacaggttttggcgatatcgccatggcagtcaatgcgtta
aaacaaggcgcttacgattttctcgaaaaaccctttaataatgaacatatgctcgatgtg
gttaaacgtgccttagataaacgcagtttgaccctagaaaaccgtaaactaaaaaaagag
ctagagagccaaagcgttccagggccacgtattttggggcacagtgttggcattaaccgt
atgcgccatattatcgaacaagtcatcaatacgcctgctgacgtattgattgaaggagaa
acaggcacaggtaaagaactcgttgcccgttatctgcacgatcacagcaaccgtaaccaa
gccaactttgtggccattaactgcggcgcgatccctgaaaatcttatcgaaagtgaactc
tttggcgccgaagctggtgcctttacgggggtcgataaaatgcgggtgggtaagtttgaa
tacgctaatggtggcacactgtttttggatgaaattgaaagtacaccactctcgctccaa
gtgaaactactcagagtgttagaagatcgtaaagttgaacgcttaggttccaataaaagc
atcaatttagatatacgtgtgattgccgccaccaaagttgatttaaaaagcctgtgtgat
actggggagtttcgtcaagatttactctaccgcttgaatctagtgacggttcccattccg
ccactaagggatcgacgtgaagatattcccctactctttttacattttgcgcgagtcgca
tcggctcgatatcacaaagcacttatcgcgttaaatgctgagcaaaatgccatactcacc
tcacacgactggccgggcaatgtacgtgaattacgtaatctggctgaacgctatgtacta
ctcggtggagaagccgcttttgccggttcacttggcaatacaccaagtctgcactccagc
atgtctttactgcaacgggtcgagtttttcgagcgtgtactgattgaggaagccttaagc
cacaacaaaggcagtatcaaactgacgatggaacagcttgaactccctcgcaaaacctta
tatgacaagatgcgcaaatatgatttagaccgcaagcagtatgtaaattcagaggactag

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