Shewanella putrefaciens CN-32: Sputcn32_2714
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Entry
Sputcn32_2714 CDS
T00513
Name
(GenBank) Deoxyribodipyrimidine photo-lyase type I
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
spc
Shewanella putrefaciens CN-32
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spc03400
]
Sputcn32_2714
Enzymes [BR:
spc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Sputcn32_2714
DNA repair and recombination proteins [BR:
spc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Sputcn32_2714
Prokaryotic type
Sputcn32_2714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ABP76433
UniProt:
A4Y900
LinkDB
All DBs
Position
complement(3138320..3139801)
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AA seq
493 aa
AA seq
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MISLKEQMATSNVGDTLMWFRQDLRLADNQALTAACDWARAQGTALRAIYIATPIQWECH
DVAPIQLDFIERHINLLAKGLGCLGIQFELIQLERFADIPQFMLDYCQQHNITRVFAGSE
PEINERVRDQACIDAGVPLLLTDEHCLLAPGTVLNLSGEMYRVFTPFSRKWREIAARHAI
LPLGVPAPLGPVLPEPKALNLAVNKVSSEQWGAGEGQAKRLLCDFIQQKVQDYKQDRDFP
ALDGTSCISPYLAIGVLSARQCVAALLQRFPEVIVDDTSLGRTWLNELVWREFYRHLLVA
FPDLSKNHNFNRQADQVQWRNNIEEFKAWCEGRTGYPIVDAAMRQLNQTGWMHNRLRMVV
ASFLTKHLLIDWRWGERYFRQKLIDGDLAANNGGWQWSAGCGCDAQPYFRIFNPMSQSEK
FDPDGSFIRKYLPELASWGIKQLHQPNTAKTPLLFKQPLFAEQAAYPSAIVDHTEARVRA
LSVLGVLKKASAL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
gtgatatcacttaaagaacaaatggctacgtcaaatgtaggcgatacactgatgtggttt
cgtcaagatttaagacttgccgataatcaagcattaacagcggcttgcgattgggcaagg
gcgcaaggtactgcacttagggctatatatattgcaactcccatccagtgggaatgccat
gatgtagcgcctattcaattagattttattgaacgtcatattaatctgcttgcgaaaggc
cttggatgtttaggtattcagtttgagttaattcaattagagcgttttgcggatatccca
caatttatgcttgattattgtcagcagcacaatattacaagggtgtttgctggctcagag
ccagagataaacgaacgagttcgcgatcaggcatgcattgatgcgggtgtgccgctgttg
ttaactgatgaacattgtttgctcgcgccaggcacagtgttgaacttatcgggtgaaatg
tatcgagtttttaccccttttagtcgaaagtggcgagaaattgccgcccgtcatgccatt
ttgccgctcggagttcccgcaccacttgggcccgttttaccagaacctaaagcgttaaat
ttagccgtgaataaagtctcgagcgaacaatggggcgcgggggaagggcaagctaagcgt
ttgctgtgcgattttatacagcaaaaagtgcaagattataaacaggatcgtgattttccg
gccctagatgggacgagttgtatttccccttatttggcgattggcgtgctcagtgcacgc
caatgtgtcgctgcattgttgcagcgttttcctgaggtgatcgtggatgatacaagcctt
ggccgaacttggcttaacgagcttgtctggcgtgagttttatcgtcatttattagtcgca
tttccagacttatctaaaaatcataattttaatcgtcaagcagaccaagttcagtggcgt
aataatattgaagagtttaaggcttggtgcgagggacgaactggttatcctattgttgat
gcagctatgcgtcagcttaatcaaacaggttggatgcacaatcgcctgcgtatggtggtc
gccagtttcttaaccaaacatttgttaatagactggcgttggggtgagcgctatttccgc
caaaaactcattgatggtgacttagcggctaataatggtggctggcaatggtctgctgga
tgtggatgtgatgcccaaccttatttccgtatttttaatccaatgagccagagtgaaaag
tttgatccagatggcagctttatccgtaaatacttaccagagctggcatcttggggaata
aagcaactgcatcaacccaataccgctaagactcctttattgtttaaacagccattattt
gccgaacaagccgcttatccgagtgccatagtggatcacaccgaagcaagggttagagca
ttaagtgtgctcggcgtattgaaaaaggcttctgccttataa
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