Shewanella putrefaciens CN-32: Sputcn32_2780
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Entry
Sputcn32_2780 CDS
T00513
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
spc
Shewanella putrefaciens CN-32
Pathway
spc00260
Glycine, serine and threonine metabolism
spc00460
Cyanoamino acid metabolism
spc00630
Glyoxylate and dicarboxylate metabolism
spc00670
One carbon pool by folate
spc00680
Methane metabolism
spc01100
Metabolic pathways
spc01110
Biosynthesis of secondary metabolites
spc01120
Microbial metabolism in diverse environments
spc01200
Carbon metabolism
spc01230
Biosynthesis of amino acids
spc01240
Biosynthesis of cofactors
spc04981
Folate transport and metabolism
Module
spc_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Sputcn32_2780
09102 Energy metabolism
00680 Methane metabolism
Sputcn32_2780
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Sputcn32_2780
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Sputcn32_2780
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Sputcn32_2780
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Sputcn32_2780
Enzymes [BR:
spc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Sputcn32_2780
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
ABP76499
UniProt:
A4Y966
LinkDB
All DBs
Position
complement(3226011..3227264)
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AA seq
417 aa
AA seq
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MLKKDMNIADYDPELFNAIQNETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVETLAIERAKQLFGATYANVQPHSGSQANSAVYMALLKPGDTVLGMN
LAHGGHLTHGSPVNFSGKLYNIIPYGIDESGKIDYDEMERIAIEHKPKMMIGGFSAYSGI
VDWAKMREIADKIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTSTTHKTLAGPRGGVIL
SAADDEELYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKVYQQQVVNNAKAMVE
VFLERGYKIVSGGTSNHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTS
GVRIGTPAITRRGFKEAEAKQLTGWICDILDDAHNPAVIERVKGQVLALCARFPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaaaagatatgaatatcgcagattatgatccggaactgtttaacgcaattcag
aacgaaactctgcgtcaagaagagcatattgagctgattgcttctgaaaactacaccagt
ccacgcgtgatggaagcgcaaggttcacagttaaccaataagtacgctgaaggctatcca
ggcaagcgttactacggtggttgtgagtatgtggacgtagttgaaaccttagcgattgaa
cgtgctaaacaattgtttggcgcaacctacgctaacgtacaacctcattcaggttctcaa
gcaaacagcgccgtttacatggcattgttaaaacctggcgataccgtactgggcatgaac
ttagcccacggtggtcacttgacccacggttcaccggttaacttctctggcaaactgtac
aacatcattccttacggtatcgatgagtctggcaaaatcgactacgacgagatggaacgt
attgccatagaacataagcctaagatgatgatcggcggtttctctgcctattcaggtatc
gttgattgggcaaaaatgcgtgaaatcgcagataaaatcggtgcttatttatttgtagac
atggcacacgttgccggtcttatcgccgcgggcgtttatccaaacccagtaccacacgcg
cacgttgtgacgtcaacgacccataaaaccttagccggtcctcgtggtggtgtgatccta
tctgctgccgatgatgaagagctatataaaaagctcaactctgctgtattccctggtggt
caaggtggtccattgatgcacgttatcgccggtaaagcggtggcgttcaaagaagccctc
gagccagaatttaaagtgtaccaacagcaagtggttaataacgctaaagctatggttgaa
gtattccttgagcgcggttacaaaatcgtctctggcggaaccagcaaccacttaatgcta
gttgacctgattggtcgtgacttaacgggtaaagaagccgatgcagccttaggtagcgcc
aacattaccgtgaacaaaaattcagtgccaaatgatcctcgttcaccctttgtgacatca
ggtgtgcgtatcggtacgccagccattacacgccgcggctttaaagaagcggaagcaaaa
caattaactggctggatctgtgacattctcgatgatgctcacaaccctgcagtgattgag
cgagtgaagggccaagtattggcactgtgcgcacgtttccctgtttacggttaa
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