Shewanella putrefaciens CN-32: Sputcn32_2829
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Entry
Sputcn32_2829 CDS
T00513
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
spc
Shewanella putrefaciens CN-32
Pathway
spc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sputcn32_2829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spc03019
]
Sputcn32_2829
03016 Transfer RNA biogenesis [BR:
spc03016
]
Sputcn32_2829
Enzymes [BR:
spc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Sputcn32_2829
Messenger RNA biogenesis [BR:
spc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Sputcn32_2829
Transfer RNA biogenesis [BR:
spc03016
]
Prokaryotic type
tRNA degradation factors
Sputcn32_2829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
KH_2
S1_RRP5
OB_RRP5_4th
KH-I_KHDC4-BBP
S1_2
Motif
Other DBs
NCBI-ProteinID:
ABP76548
UniProt:
A4Y9B5
LinkDB
All DBs
Position
complement(3286214..3288313)
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AA seq
699 aa
AA seq
DB search
MNPIVKSFEYGQHTVTLETGVIARQADAAVLASMGDTTVLVTVVGKKEAEAGRDFFPLTV
NYQEKTYAAGKIPGGFFKREGRPSEDETLIARLIDRPIRPLFPNGFKNEVQVIITVVSVD
PQIEPDIISMIGTSAALAISGIPFSGPLGAARVGYINGEYVLNPTVAQIETSQLNLVVAG
TASAVLMVESEAQALPEEVMLGSVVYGHDQQQVVINAIAEFKAEAGKPMWDWTAPVQDET
LVAQIKELAEAGLGDAYKIQVKQDRYAQVAVVKAATKEALLASNPNIDLREVDNLLGSLE
KKVVRGRIIRGEPRIDGREPDMIRALSVLAGVLPRTHGSALFTRGETQALVTCTLGTERD
AQKIDSIMGERTNRFMLHYNFPPYSVGETGMVGSPKRREIGHGKLAWRGINAVMPSAEEF
PYSVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKTSVAGIAMGLVKEGDDFVVLSDI
LGDEDHLGDMDFKVAGTRGGITALQMDIKIEGITKEIMEIALQQAYGARVHILNVMDQAI
GSHRDDISDHAPRITTIKINPEKIRDVIGKGGAVIRALTEETGTTIELEDDGTVRIASSN
GEATKEAIRRIEEITSEVEVGRIYNGKVIRIVDFGAFVNILPGKDGLVHISQISDERVAN
VSDHLELNQEVAVKVMEVDRQGRVRLSIKEAQTKEAAAE
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccaattgtaaagagttttgagtatggtcaacatacagtcaccctggaaacaggc
gttatagcgcgtcaagctgatgccgctgtgttagcaagtatgggtgacacaacagtgtta
gtcactgttgttggtaaaaaagaagccgaagccggtcgtgattttttccctctgactgtt
aactatcaagaaaaaacctacgcagcaggtaaaattcctggcggtttctttaagcgtgag
ggtcgtccttcagaagatgagacattaattgctcgtcttattgaccgcccaattcgtcct
cttttccctaatggtttcaaaaacgaagttcaagttatcatcacagttgtatctgtcgac
ccacaaattgagccagatatcatctctatgatcggtacttctgctgcattggccatttct
ggtatcccgtttagcggtcctttgggcgctgctcgtgtcggttatatcaatggtgaatat
gtattgaacccaacagtggctcaaattgaaacgagccaattgaacttagtggttgctggt
acagcaagtgcagtgttaatggtggaatcagaagcccaagcattaccagaagaagtgatg
ttaggttctgttgtttatggtcacgatcaacaacaagtggttattaacgcgattgctgag
tttaaagctgaagcgggtaaaccaatgtgggattggactgcgccagtgcaagatgaaacg
cttgttgctcaaattaaagagttggctgaagcgggtttaggcgatgcgtataaaatccaa
gttaagcaagaccgttatgctcaagttgctgtagttaaagctgcaacgaaagaagcgtta
ttagcaagcaatccaaatattgatttacgtgaagtagacaatttactgggcagcttagag
aagaaagtcgttcgtggtcgtattattcgtggcgagccgcgtatcgatggtcgtgaaccc
gatatgatccgtgcgttaagtgtattagcgggagtattgccacgtactcacggtagcgcc
ttgttcactcgcggcgaaacccaagccttagtaacttgtactttaggtactgaacgtgat
gcacagaagatcgatagcatcatgggtgagcgcactaatcgttttatgttgcactataac
ttccctccttactctgttggtgaaaccggtatggtgggttcacctaagcgccgcgaaatc
ggtcatggaaagttagcatggcgtggtattaacgctgtgatgccatcggcagaagaattt
ccatacagcgtgcgcgttgtatctgaaattactgaatctaatggttcaagttctatggcg
tctgtctgtggtacttcccttgcgctgatggatgcgggtgtacctatcaagacttctgta
gcaggtattgctatgggtcttgtaaaagaaggcgatgattttgtcgtactttcagacatc
ttaggtgatgaagatcatttaggtgatatggactttaaagtggcgggtacccgtggtggt
attactgcactgcaaatggatatcaagatcgaaggtatcaccaaagaaattatggaaatt
gcactacaacaagcctatggcgcacgtgtgcatattctaaatgtgatggatcaagcgatt
ggttcgcaccgtgatgatatttctgatcatgctccacgtatcactacaatcaaaattaac
ccagagaaaatccgtgatgttatcggtaaaggtggcgcagttattcgtgctctgaccgaa
gaaactggcactacgattgagctggaagatgatggtacggtaagaattgcctcttcaaat
ggtgaagcgaccaaagaagctatccgccgtattgaagaaatcacttcagaagtcgaagtg
ggccgtatctataatggtaaagtgatccgtatcgttgatttcggtgcatttgtgaacatt
ctgccgggcaaagatggtttagtacacatttcacaaatcagtgatgaacgtgtggctaac
gtgtctgatcaccttgaacttaaccaagaagttgctgttaaggtaatggaagtggatcgt
caaggtcgtgtacgcttatcaatcaaagaagcacaaacgaaagaagctgcagcagaataa
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