Shewanella putrefaciens CN-32: Sputcn32_2832
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Entry
Sputcn32_2832 CDS
T00513
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
spc
Shewanella putrefaciens CN-32
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spc03016
]
Sputcn32_2832
Enzymes [BR:
spc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Sputcn32_2832
Transfer RNA biogenesis [BR:
spc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Sputcn32_2832
Prokaryotic type
Sputcn32_2832
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ABP76551
UniProt:
A4Y9B8
LinkDB
All DBs
Position
complement(3291032..3291988)
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AA seq
318 aa
AA seq
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MARRPKGRFIDGIVLLDKSTGMSSNFALQRVKRFFNANKAGHTGALDPLATGMLPVCLGE
ATKFSQHLLDADKRYLVTAKLGERTDTSDSDGEVVQTRPVTFTEAQLLSALEHFRGDTQQ
VPSMYSALKYQGQPLYKYAREGIEVPRESRPITVFELNFISLEGDELTLDIHCSKGTYIR
TIIDDLGEMLGCGAHVIMLRRTQVAQYPYAKMVTLEQLEALVTQAHEQQIDPSVLLDPLL
LPMDTAVADFPEVNVPEASAAYLMQGQAVRVTGLKADTLVRITLGDAHRFVGIGAMNDDG
LLAPKRLIVIHDEPIVTD
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgtccgaaaggccgttttatcgatgggatagtgttactggataaatccact
ggcatgagttctaactttgccttgcaaagggtaaagcgcttttttaatgcgaataaagcc
gggcatacgggtgcactcgatccgttagcgacaggtatgttaccagtgtgcctaggtgaa
gcgactaagttttcccagcacttattagatgctgataaacgttacttagtgacagcaaaa
ctgggcgagcgtaccgataccagtgattcagatggtgaagtggttcagacgcgcccagtt
acatttactgaggcgcaactactgagtgcgcttgagcactttcgtggtgacactcagcaa
gtgccttctatgtattccgcgctgaaatatcaggggcagcctctgtataaatatgcgcgt
gaaggcatagaagtgccgcgagaatctcgccctattacggtatttgagcttaatttcatc
agtcttgaaggtgatgagttgaccttagacattcattgctctaaagggacttatattcgc
accatcattgatgatcttggtgaaatgttaggttgtggcgcccatgtgattatgttgcga
cgaactcaagttgcacagtatccctatgccaaaatggttacactagaacagctcgaagca
cttgtcacccaagcacatgaacaacagatagatccgagtgtattactcgatcctctctta
ttacccatggatacggcagtggctgactttcctgaggtcaatgtgcctgaagcgagtgcg
gcttatttgatgcaaggccaagcggtacgtgtgacaggtctaaaagctgacacattagtg
cgtatcaccttaggggatgcgcatcgattcgttggtattggtgcaatgaatgatgatggc
cttttggcgccgaaacggctcatagtgatccatgacgagccgatagtcacagattaa
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