Shewanella putrefaciens CN-32: Sputcn32_2835
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Entry
Sputcn32_2835 CDS
T00513
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
spc
Shewanella putrefaciens CN-32
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spc03021
]
Sputcn32_2835
03009 Ribosome biogenesis [BR:
spc03009
]
Sputcn32_2835
Transcription machinery [BR:
spc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Sputcn32_2835
Ribosome biogenesis [BR:
spc03009
]
Prokaryotic type
rRNA transcription factors
Sputcn32_2835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
DUF2187
S1_RRP5
Glyoxalase_4
McpB_HAMP_2
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-ProteinID:
ABP76554
UniProt:
A4Y9C1
LinkDB
All DBs
Position
complement(3295169..3296668)
Genome browser
AA seq
499 aa
AA seq
DB search
MNKEILLVAEAVSNEKAVPREKIFEALEIALATATKKKYDGDIDVRVAIDRKTGGYETFR
RWMVVDDHGEALENPFREITLEAARYENPDIQPGEFIEDDIESVVFDRITTQTAKQVIVQ
KVREAERAQVVEQFRDKEGELITGVVKKATRESVVVDLGNNADGVLFREDLISRESFRPG
DRVRALLYSVRPEARGAQLFLSRTKPEMLIELFRVEVPEIADELIEVMGAARDPGARAKI
AVKSNDRRIDPIGACVGMRGARVQAVSNELGGERVDIVLWDDNPAQYVINAMAPADVASI
IVDEDNHSMDIAVEADSLAQAIGRNGQNVRLATQLTGWELNVMTVEDMNKKHQAESAKVV
SLFINSLDVDEDFAQVLANEGFTSLEEVAYVPVSELLAIDGFDEDLVEALRERAKAAIST
RALASEEALDGVEPSDELLALEGVERHLAYVLASKGIVTLEDLAEQGIDDLIEIEELTEE
KAGTLIMAARNICWFGEEA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagagatcctgctagtcgctgaagcggtttcaaatgaaaaggccgttccacgc
gagaaaatttttgaagcgctagagatcgctctggctactgcaaccaagaaaaaatacgat
ggcgatattgatgtccgcgttgcgattgaccgcaaaacgggtggctatgagacattccgc
cgttggatggtcgttgatgatcacggtgaagccttagaaaacccatttcgcgagattacg
cttgaggcggctcgttatgaaaatccggatattcaaccgggtgagtttatcgaagacgat
atcgagtctgttgtatttgaccgcattacgactcaaaccgccaaacaagtgatcgtacaa
aaggtacgtgaagctgaacgtgctcaagtggttgagcagttcagagataaagaaggcgaa
ctgatcactggcgttgtgaaaaaagcaacccgtgaaagtgtcgtggtcgatttaggcaat
aatgctgatggcgtgctgttccgtgaagatttaatttcacgcgaatctttccgccctggt
gaccgtgtgcgtgcattattgtactcagtacgtccagaagctcgcggtgcacaattattc
ctaagccgtactaaacccgaaatgctgattgagcttttccgtgttgaagtacctgaaatc
gctgatgaattgatcgaagtcatgggcgcagcccgtgatccaggcgcacgcgctaagatc
gcggttaagtcgaatgatcgccgtatcgatcctatcggtgcgtgtgttggcatgcgcggc
gcacgtgtacaagcagtatcaaatgaactgggtggcgagcgtgttgatatcgtattgtgg
gatgataatccagcacaatatgtgatcaatgccatggcgccagctgatgtagcttctatc
atcgtcgacgaagataaccattcaatggatatcgcggttgaggctgatagtttggcacaa
gccattggacgtaatggccagaacgtacgtttagcaactcaacttacgggttgggaactg
aacgtaatgacagtggaagacatgaataagaaacatcaggctgaaagtgccaaagtggtg
agtctgtttattaattcactggatgtcgatgaagattttgcacaagtactagcgaatgag
ggctttacgtcgcttgaagaggtcgcttatgtacctgtgtctgaattattggcgatagac
ggtttcgacgaggatctcgttgaagctttacgtgaacgtgcaaaagctgcgatctcgaca
agagcgctcgcatctgaagaagcactggatggtgtggagccaagtgatgagttgttagca
cttgaaggtgttgaaagacacttagcctatgttttagcaagcaaaggtattgtgactcta
gaagacttggctgaacaaggcattgatgatttgatcgaaattgaagaattgacagaagaa
aaagcaggtacgctcatcatggctgcccgcaacatctgttggtttggcgaagaagcataa
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