KEGG   Shewanella putrefaciens CN-32: Sputcn32_2912
Entry
Sputcn32_2912     CDS       T00513                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
spc  Shewanella putrefaciens CN-32
Brite
KEGG Orthology (KO) [BR:spc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:spc02048]
    Sputcn32_2912
Enzymes [BR:spc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Sputcn32_2912
Prokaryotic defense system [BR:spc02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Sputcn32_2912
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N T1R_D3-like ResIII
Other DBs
NCBI-ProteinID: ABP76629
UniProt: A4Y9J6
LinkDB
Position
3375839..3378976
AA seq 1045 aa
MTEDQLEQEALGWLGEIGYTHICGYDIAPDGANPERQDYRQPLLLERLRSAIARLNPQIP
QQAREDALASVMDLRIPSLLSANRHFHGVLVNGVPVSYQKDGETRGDFVRLIDWENRPGT
NEFLAVNQYTLKGPHHSRRPDIILFINGLPLVLFELKNPADEHADIWKAYDQIQTYKEQV
PDVFQYNEILVISDGTEARMGSLSANAERYMQWRTIDGVNLDPLGAFGELETMVRGVFAP
AYLLDYLRFFVLFEDDGQLVKKIAGYHQFHAVRSAITQVVTASRPDVMGSNKGKGGVVWH
TQGSGKSITMTCFAARVMREAAMENPTIVVITDRNDLDGQLFGVFSLAQDLLREQPVQVE
TRQDLRAKLANRPSGGIIFATIQKFAPGADEDVFPILSDRHNIVVVADEAHRTQYGFEAK
LKVPELNAGVAEASAAYHSRYQVGFAQHLRDALPNATFVAFTGTPVSSEDRDTRAVFGDY
IHIYDMQQAKEDGATVAIYYESRLAKLKLKEEELPHIDDEVDELAEDEEEEQQSKLKSKW
SALEKIVGAEPRIVKVAADLVAHFEARQQAQTGKAMVVAMSREICVHLYNAICALRPDWH
DDDPEKGAIKIVMTGSSSDKPLLRPHIHSKQVKKRLEKRFKDPKDPLQIVIVRDMWLTGF
DAPCVHTLYVDKPMKGHNLMQAIARVNRVFRDKQGGLVVDYIGIANELKSALKEYTASNG
RGRPTVDAAEAWSLLEEKLDILRSLLHGFDYSDFTKGGHKLLAGAANHILGVEDGKKRFA
DNALAMSKAFSLCCTLDEAKAVREEVAFLQAVKVLLTKRDLSAKKRSDEEKDIAIRQIIS
QAVVSDEVVDIFDAVGLEKPNIGLLDDEFLAEVRNLPEKNLAVELLERLLEGEIKSRFAS
NVIQQKKFSELLSNVVKRYQNRSIETAQVMEELVDMAKKFREAAKRGESLGLSDDEVKFY
DALANNEAAVLELGDEILKKIAHELTDNLRANISVDWSQRESVRAKLRIMVKRILRKYKY
PPDQADGAVQLVLQQAEALGEQWAA
NT seq 3138 nt   +upstreamnt  +downstreamnt
atgactgaagaccaactggaacaagaggcactaggctggttaggtgagattggttatacc
cacatttgcggctatgacatcgccccagatggcgccaatcctgaacggcaggattatcgc
caacccttgttgctagagcgattaagaagcgctatagcgcgtcttaacccgcaaatccca
caacaggcccgtgaggatgcattggcctccgtaatggatttgcgcatcccttcccttctt
tcagccaatcgccattttcatggggtgttagtcaatggtgtgcctgttagttatcagaaa
gacggtgaaacccgtggtgattttgtccgactgattgactgggaaaaccgccctggtacc
aatgagtttttagctgtaaatcaatacaccttaaaaggccctcaccattcacggcgcccc
gatatcatcctgtttattaatgggctgccattagtactttttgagcttaaaaacccggca
gatgaacacgccgatatctggaaagcatacgaccaaatccagacctataaagagcaagta
ccggacgtattccaatacaatgaaattcttgtcatatcggacggtaccgaagcacgcatg
ggttcattatcagccaatgccgagcgctatatgcaatggcgcaccattgatggtgttaac
ctcgacccacttggggcttttggtgaacttgaaaccatggtcagaggggtatttgccccg
gcttatttactggattacctgcggtttttcgtcctatttgaagatgatggtcagttggtt
aagaaaatcgccggatatcaccagttccatgcggtgcggtctgcaataacccaggtcgtc
accgcatctcggcctgatgtaatgggaagcaataagggtaaaggcggggtggtttggcat
acccaaggcagcggcaagagcatcaccatgacctgttttgcggcacgagtcatgcgcgaa
gccgccatggaaaaccccacgattgtggtcatcacagatcgtaacgacttagacggccaa
ttgtttggcgtattttcgctggcgcaagatttgttacgtgaacagccagttcaggttgaa
actcgccaggatctgcgtgctaagctcgctaatcgtccctctggcggtatcatctttgcc
acaattcaaaagttcgcccccggcgccgatgaagacgtgttcccaattttatcagataga
cacaatatcgttgtcgtcgccgatgaggcacaccgaacccagtatggttttgaagctaag
cttaaagtgcctgagttaaacgcgggtgttgccgaagccagcgcggcttatcacagccgt
tatcaagtcggctttgcccagcatttacgcgatgccttacccaatgcaacctttgtagcc
tttaccggtacccctgtttcaagcgaggacagggatacccgtgcagtatttggcgattac
attcatatttatgatatgcagcaggccaaagaggatggcgcgacagttgccatctactac
gaatctagactggcaaaactcaagcttaaagaggaagagctgccgcatatcgacgatgaa
gtcgacgaactggccgaagacgaggaagaggaacagcaatctaaacttaaatctaagtgg
tcagcacttgaaaaaatcgtcggtgcagaacctaggatagtcaaagtcgccgccgatctg
gttgcgcactttgaggcacgccagcaggcccaaaccggtaaggcgatggtggtagccatg
agccgagaaatttgtgtgcatctttataatgccatctgtgctctacgcccagactggcat
gatgacgatcctgaaaagggcgcaatcaaaatcgtgatgacaggctcaagcagcgataaa
ccgctactgaggcctcatattcactcaaagcaagttaaaaaacgtctagaaaagcgtttt
aaagaccctaaagacccacttcaaatagtaattgtgcgcgatatgtggctaaccggcttt
gatgccccttgtgttcataccctgtatgttgataagccaatgaagggccataaccttatg
caagcaattgctcgggtaaaccgggtatttagggataaacaaggcgggctggtggttgat
tacatcggcatagcaaacgaacttaagtctgcattaaaagaatacactgcgagtaatggc
agaggccgtccgacggttgacgcggccgaggcttggtcattacttgaagaaaagctcgac
atcctacgcagcctgctccacggattcgattacagcgacttcactaagggcggccacaaa
ctgctcgcaggagccgcaaaccatatccttggggtcgaagatggcaaaaagcgctttgcc
gataatgcattggccatgagtaaggcttttagcctttgctgtaccctagatgaggctaaa
gcagtacgagaagaggtggcctttttgcaggcggtcaaagtactgctgactaagcgcgac
ctcagcgccaaaaaacgcagcgatgaagaaaaagacatcgccattcgccaaataattagc
caagccgttgtgagtgatgaggtagtcgatatctttgatgctgtcgggttggagaaaccc
aatatagggctactggacgatgagtttttggccgaggttcgcaacttacccgaaaaaaac
ctcgctgttgagctgctggagcgactgcttgaaggggaaattaaaagccgttttgccagc
aatgtaatccaacagaaaaagttttctgagctgctatcaaacgttgttaagcgttatcag
aaccgcagtattgaaaccgctcaagtcatggaagagctggtggacatggccaaaaaattc
cgtgaagcagccaagcgcggtgaatcattagggctcagtgatgacgaggtgaaattttac
gatgcactcgccaacaacgaagccgcagtgcttgagctcggcgatgaaatcttaaagaaa
atcgcccatgagctaaccgataacctaagggccaatatcagtgtggattggtcacagcgt
gaaagcgttcgcgctaaattacgcattatggtgaagcgaatattacgtaaatacaaatat
ccgcccgaccaagctgatggcgcagtgcaattggttttacaacaagctgaggccttaggc
gagcaatgggcagcctaa

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