Shewanella putrefaciens CN-32: Sputcn32_3051
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Entry
Sputcn32_3051 CDS
T00513
Name
(GenBank) formate dehydrogenase, alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
spc
Shewanella putrefaciens CN-32
Pathway
spc00630
Glyoxylate and dicarboxylate metabolism
spc00680
Methane metabolism
spc01100
Metabolic pathways
spc01120
Microbial metabolism in diverse environments
spc01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Sputcn32_3051
09102 Energy metabolism
00680 Methane metabolism
Sputcn32_3051
Enzymes [BR:
spc01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
Sputcn32_3051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Pyr_redox_2
Molydop_binding
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Fer2_4
Pyr_redox_3
NAD_binding_8
Fer4_7
DAO
HI0933_like
Fer4
NAD_binding_7
Fer4_6
Fer4_8
GIDA
Thi4
FAD_oxidored
Amino_oxidase
Fer4_9
FAD_binding_3
FAD_binding_2
Fer4_2
AlaDh_PNT_C
Fer4_10
Fer4_21
Fer4_18
Lys_Orn_oxgnase
Shikimate_DH
Fer4_16
Fer4_4
Fer4_15
Fer4_22
Fer4_Nqo3
Motif
Other DBs
NCBI-ProteinID:
ABP76764
UniProt:
A4Y9Y1
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All DBs
Position
3535188..3539462
Genome browser
AA seq
1424 aa
AA seq
DB search
MIELQIDDQVLLVNPNNTLLQAAHNAGITIPSLCDQNAASQQLVTDKHNQKHDDKQSCNL
CVVQIENADASLRCVRACETPVEMGMRVITQSAYLSKKRKQALNNILSDHFADCEAPCQQ
ACPAGVDVQSYLYHIAQGNHTQAIKVIKQTLPLPLSIGRVCPAFCEAECRRGSVDEPIAI
RQLKRHAADLDLAEGENGGMSYVPERQAETGKRVAIIGAGPAGLSAGYYLSNQGHSVEIF
EAMPQAGGWLRYGIPEYRLPKAILDKEIDLLCRNGLMIHTQTRLGHEVHLTQLAKDFDAI
CLAIGAQKAVPMDYPGSTLKGCYLGVDYLKDHCLEKSLPLGKKVAVIGGGNTAIDCARTA
VREGCDVTLIYRRTRAEMPAEAYEVHEAEVEGVKFHFLTNPIENHSDADGHVCAVTFAKM
ALGEADASGRRAPINTGETFTQDFDTVIAAVSQTPDMSFLQDPASHLSQGEIALSRWNTF
IGCEHTMSAGIEKLFVIGDSRRGPATAVAAIGDGHKAAQAIDKMLKQGLSCELYSGEFNS
SKAVSHNSKQDQIAQDLYPNVQRQARLKMPELTAVQRLLNYSEVELGFAPDAAMKEAARC
LECACQANTNCKLRDYATDYKVESKQLNTDFARQFVVDKSSPFIQFDANRCISCGKCVDA
CNQQSGHCVIQFAYDSYQALPQTEDLTQERRAPRVGFSASMADSQCVQCGNCVQVCPTGA
LVDARDKRQGDKTSLKTASTICTYCGVGCRLDLKIDENTHRIRHIEGNKDSVVNQGMLCV
KGRFGFDFIHSEKRLTTPLIRKNGQLQPCSWQEAIDYIAKNLTDIKQQYGSNALASLASA
KATNEDNFILQKFVRSVLGTNNIDHCARLCHSSTVTGLQQSIGSGAMTNDIPSIQDSDVI
FILGSDTTSAHPIIASKIKQAVTLHGARLIVADPKRVAIADNAELYVAQRPGTDVMLLNA
IMAEIIRNEWHDKTYIAERTEGVDALYAELAKDDYSLENAALITGVNASEIAQLARIIGT
AEKTAIYYAMGITQHTTGHDNVTAISNLQLLCGNIGIKGAGINPLRGQSNVQGACDMGAL
PNYFTGYQKVTDIHAKMRFEAYWQTPLSGEIGVTATHMMHDISKGKIKALYVMGENPVLS
DPDQAHVLRALNQIDFLVVQDIFLTETAELAHVVLPAASFVEKRGHFTNTERRVQRLEQA
LPAPGVALPDWQIVQKIANAMGANWNYIHEEDIWHEINELTPQYRGIRWQRLSQQDNGDF
PQGIQWPCPDEDHPGTPIMHQNQFTRGLGKFTPVSYRLPAEMPCSEYPLTLSTGRLLEQF
HTGTLTRKTPGLDLLGSPKVMISVYDAERLGISNGDKIKLTTRRGEIEIDAFVTKRAQAG
VLFLPFHFVEAAANKLTINALDPVAYIPEYKVCAVKAEKVTSCG
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atgatagaacttcaaattgatgaccaagtgctgttggttaacccaaacaacacactactg
caagcagcacataatgcagggataaccatccccagcctatgcgatcaaaacgcggcctca
cagcaattagttacagataaacacaatcaaaaacatgatgataaacaatcctgtaactta
tgcgtggttcaaattgaaaatgccgatgcaagccttcgttgcgtacgggcttgtgaaaca
cccgttgagatgggaatgcgggtaatcactcaatcagcctaccttagtaaaaagcgtaag
caagcactcaacaatatcctaagcgaccactttgccgattgtgaggcaccgtgccagcag
gcctgcccagcgggtgtcgatgtgcagagctatttatatcacattgcccaaggtaaccat
acgcaagccattaaagttattaaacaaaccttgccattacccttatctattggccgtgtc
tgcccagcattctgcgaggccgaatgtcggcgaggaagtgtcgatgaacctatcgccatt
cgccaattaaaacgtcacgctgccgatttggatttagcagaaggtgaaaatggtggtatg
agttacgtccccgaacgccaagctgaaacgggtaaaagggtcgccattatcggagcgggt
cctgcgggattaagtgctggatactatttatcaaatcaagggcatagcgttgagatattt
gaagcaatgccccaagcgggcggctggctacgttacggtattcctgaataccgtttaccc
aaagcgatattagacaaagaaatagacttactttgccgtaacggattaatgatacacact
caaacccgcctagggcatgaggtacatctaacccaattagctaaagattttgatgccatc
tgccttgctattggcgcccaaaaagccgtgccgatggattatcccggtagcacgcttaag
ggatgttatttaggcgtggattatttaaaagaccattgcctcgaaaaatcgttaccacta
ggcaaaaaagtagccgtcattggtgggggaaataccgctatcgattgcgctcgcactgca
gtacgtgaaggctgcgatgtcactttaatctatcgtcgtacccgtgctgaaatgcctgca
gaagcctatgaagtccatgaagctgaagttgaaggggtcaaatttcacttcttaacgaat
ccgattgaaaaccatagtgatgcagatggccatgtctgcgcggtcacctttgctaaaatg
gcacttggtgaagccgatgcttcaggcaggcgagcaccgattaatacgggggaaaccttt
acccaagactttgatactgtgatagccgcggtatcacaaaccccagatatgagttttctg
caggatcctgcgagtcatttaagccaaggagaaattgctcttagccgttggaataccttt
atcggctgtgaacacactatgtccgcgggtattgaaaaactgtttgtgattggcgattct
cgccgaggcccagccaccgctgttgccgccattggtgatggacacaaagcggcacaagcc
attgataaaatgttgaaacaagggctaagctgcgaactgtatagcggtgaatttaattca
tctaaagcggttagtcacaatagtaaacaagatcaaatagcacaggatctttatcctaat
gttcagcgtcaggcacgcttaaaaatgcccgagttaaccgctgtacaacggctcctgaat
tacagtgaggtagaactaggattcgcacctgatgcggccatgaaagaggcggcacgctgt
ttagaatgtgcctgtcaggccaatacaaattgcaaactaagagattatgcgactgactac
aaagttgaatcaaaacaactaaacaccgattttgctcgtcaatttgtggttgataaatca
agcccttttatccaatttgatgccaatcgctgtatcagttgcggtaaatgtgtggatgcg
tgcaaccaacaaagtgggcactgcgtcattcaatttgcctatgattcttaccaagcactc
ccccaaacggaagatctgacccaagaacgccgcgcccccagagtcggctttagtgcatcc
atggcggatagccaatgtgttcaatgtggtaattgcgtccaagtttgccctacaggtgcc
ttagttgacgcccgagacaaacgccaaggggataagacatcactcaaaaccgcttccact
atctgtacttactgtggtgttggatgcagactcgacctcaaaatcgatgaaaatacccat
cgcatccgtcatatcgaaggtaataaggactcagtcgttaaccaaggtatgttgtgtgtt
aaaggccgttttggtttcgattttattcacagcgaaaaacgcctgaccactccactcatc
cgtaaaaacggacaactccagccttgttcttggcaggaggctattgactatatcgccaaa
aacttgaccgatataaagcaacaatatggcagtaatgcgctggccagtctcgcctccgcg
aaggccacaaacgaagataattttatactgcaaaagtttgtccgtagtgtacttggcacc
aacaatatcgaccactgcgcccgcctgtgccactcatcaaccgtcacaggcctgcaacaa
agtattggcagcggcgctatgaccaatgatattccgagcatccaagactctgatgtcatt
tttattttaggttcagataccaccagcgcgcaccccattattgcgtccaagataaagcag
gcggtgacattacatggggcaagattaatcgttgccgatcctaaacgtgtcgctattgcc
gataacgctgaactctatgtcgcccaaaggcccggcacggatgtgatgctactcaatgct
attatggcggaaatcattcgtaacgaatggcatgataaaacctatattgccgagcgcaca
gaaggtgtggacgctctatacgcggagcttgctaaggatgattactccctagaaaacgcc
gcacttatcactggcgttaatgcaagtgaaattgcccaactcgcacgcatcatcggcacc
gctgaaaaaacagctatttactatgcaatggggatcactcagcacaccacagggcatgac
aatgttaccgctatttctaacctgcaactgttgtgtggcaatataggtatcaaaggggcg
gggattaatcccctacgtggccaaagtaatgtgcagggtgcttgtgatatgggcgcacta
cctaactattttactggctatcaaaaagtgaccgatattcatgccaaaatgcgctttgag
gcctattggcaaactccgctctctggtgagattggtgttacagcaacccatatgatgcat
gatatttccaaagggaaaatcaaggcgttatatgtaatgggggaaaatccagtattaagc
gacccagaccaagcccatgtgctaagggcgcttaaccaaatagattttctcgtggtgcag
gatatctttctaactgaaaccgcagaactagctcatgtcgtattgccagccgcctctttt
gtggaaaaacgcggtcactttaccaacacagaacgacgggttcagcggcttgagcaagct
ctgcccgcaccaggggtagcattgcctgattggcagattgtgcagaaaattgctaacgcg
atgggcgcgaattggaattacatccacgaagaagatatatggcatgaaattaatgaatta
acaccacagtatcgtggtattcgttggcaacgattaagtcagcaggataatggtgacttt
cctcaaggtattcaatggccctgtccagatgaagaccatcccggaacccccattatgcac
caaaaccaatttacacgcggcttaggcaaatttacgcctgtcagttaccgcttacccgcc
gaaatgccctgtagtgaatatccactaacactttcaactgggcgattattggagcaattt
catacaggtacattaacgcgtaaaacaccaggactcgatttactcggctcacctaaggtg
atgatttccgtctatgatgccgagaggctcgggattagtaatggcgataaaattaaactc
acgacacgccgtggtgagattgaaattgatgcctttgtgactaaacgcgcccaagctggc
gtgctattcctacctttccattttgtcgaagcggcagccaataagctcaccatcaatgcc
cttgatcctgttgcttatattcccgaatataaagtgtgtgcagtcaaagcagaaaaggta
acgagttgcggctaa
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