Shewanella putrefaciens CN-32: Sputcn32_3257
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Entry
Sputcn32_3257 CDS
T00513
Name
(GenBank) Lytic transglycosylase, catalytic
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
spc
Shewanella putrefaciens CN-32
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spc01011
]
Sputcn32_3257
Enzymes [BR:
spc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Sputcn32_3257
Peptidoglycan biosynthesis and degradation proteins [BR:
spc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Sputcn32_3257
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM_OapA
LysM1_NFP_LYK
Motif
Other DBs
NCBI-ProteinID:
ABP76969
UniProt:
A4YAI6
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All DBs
Position
3788677..3790092
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AA seq
471 aa
AA seq
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MRKNFRQMHAFAVLMLAMLTAHLSGCVATSADNAPTEFTATTPEEIGKSDHSAQETSDTP
EPVEEQYSDVWEKIQHARTIDVHDEAEVRKQRKFFADKQRFMNQVGDRAEPFLYYIVSQL
EARNMPLELALLPIVESGYNPLAQANGPAGLWQMIPATGRNFGLTINSAYDGRKDALAST
DAVLDYLQHLYDTLGNDWINAVAGYNSGELVIKSAIERNKAKGKPTDFWSLNIPARQVQT
VPKWLAFIQIIREPSHYNLKVPPVANRPFLERLPAPNGVEIGHIANAAGLTKAEFKTYNP
GYRQNVIPSKGKYQIALPIENIGAYQENQDKLYAQKRYDSQSYIVKSGDSLGAIAAKFDI
SVNELKQANNLTSDRIKVGQELTLLTPLAANDKETKVAPATPKTSSKSSAKVTETKAKTT
ETKAATYKVKSGDSLDKIARKHKVKLADLMKWNQLNAKSIIKPGQELKLSE
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaaaattttcgccaaatgcacgcttttgcagtgcttatgctagccatgctaacg
gctcatctcagtggctgcgtagccacctcggcggataatgcgccaacagaattcactgcc
actacgcctgaagaaataggtaaaagtgaccattcagcacaagagaccagcgatacacct
gaacccgttgaagaacaatacagcgacgtatgggaaaaaattcaacatgcgcgcactatt
gacgtacacgatgaagcagaagtacgtaaacaacgtaaattttttgctgataaacaaagg
tttatgaatcaagttggtgaccgtgcagagccttttttgtattacatcgtcagtcaacta
gaagcccgtaatatgccgcttgaattagccttattacctattgttgaaagcggttataac
ccactagcgcaagccaatggtccggcgggtttatggcagatgattcctgcaactggtcgc
aattttggcctgaccattaattccgcttatgatggtcgtaaagatgcgctggcctcaact
gatgccgttctcgactacttacagcacttatacgataccctaggcaatgactggatcaac
gctgtagcgggctataacagtggtgaattggttataaaatccgcaatagaaagaaacaaa
gcaaagggaaagccaaccgatttttggtcacttaatatccctgcaagacaagtacaaaca
gtccctaagtggctcgcttttattcaaattattcgcgagcctagccattacaacttaaaa
gtgcctccagttgccaatcgccctttccttgagcgactccccgcacctaatggcgttgaa
attggccacattgccaatgcggcgggactcactaaagcagagtttaaaacctataaccct
ggttaccgtcaaaatgtgatccccagtaaaggcaaatatcaaatagcccttcccattgaa
aacattggtgcctatcaggaaaatcaagataaactctatgcccaaaaaagatatgacagc
caaagttacatcgtcaaatcgggtgatagtctaggtgctatagcggctaagtttgatatc
tcagtgaatgagttaaaacaggcgaataacctcacatcagataggatcaaagtaggccaa
gaactcacgctattaacccctttggcggctaatgataaagagactaaagttgccccagca
acgcctaaaacaagcagtaaatctagcgccaaggtcactgaaacaaaagctaaaacgacg
gaaacaaaagcggctacttataaggtaaaatccggtgactcactggataaaatcgcccgt
aaacataaagtcaaactggctgatttaatgaagtggaaccagctaaatgctaagagcatt
attaaacccggccaagagctaaagctatccgagtaa
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