Shewanella putrefaciens CN-32: Sputcn32_3302
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Entry
Sputcn32_3302 CDS
T00513
Name
(GenBank) SNF2-related protein
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
spc
Shewanella putrefaciens CN-32
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spc03021
]
Sputcn32_3302
Transcription machinery [BR:
spc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Sputcn32_3302
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
AAA_34
Motif
Other DBs
NCBI-ProteinID:
ABP77014
UniProt:
A4YAN1
LinkDB
All DBs
Position
3850547..3853453
Genome browser
AA seq
968 aa
AA seq
DB search
MPFALGQRWISDTESELGLGTVVQVEGRMVTVLFPATGENRMFSRAEAPLTRVTYNSGDT
VESHEGWSLTIEELTEKDGLVIYHGIHSETGEQVTLRETLLNHNIRFNKPQDRLFAGQID
RLDRFGVRYQCQMLRHKLATSDLLGLQGPRVGLIPHQMWIAHEVGRRYAPRVLLADEVGL
GKTIEAGLIIHQQLLTGRAERVLVIVPDTLRHQWLVEMLRRFNLRFSVFDEDRCVEAYAD
HDNPFYTEQLVICSLELLRKKKRLDQALDADWDLLVVDEAHHLEWTEEAPSRAYQVVEAL
SEVVPGVLLLTATPDQLGHESHFARLRLLDPDRFYDYDAFLAEEDSYKDVAMAAEALAGN
AKLPDAAINSLTELLSEKDIAPSIRLIQADGIDSELQQAARSELLQELLDRHGTGRVLYR
NSRASVKGFPKRFFNPHPQTMPEQYLTAARVSSMMGGHKTLEAKAAQALSPEKLYQEFED
NSASWWKFDPRVDWLIAFLKSHRSKKVLIIASQAETALSLEEALRTREGIQATVFHEGMS
IIERDKAGAYFAQEEGGAQALICSEIGSEGRNFQFASHLVLFDLPLNPDLLEQRIGRLDR
IGQKNDIQIHLPYLEDTAQERLMQWYHQGLNAFELTCPSGHVLYAEFAEDLLNVLVGDDA
DELTNLLNHTQTRYKELKHAMEQGRDKLLEINSHGGDRAKAIVERLAQNDENTQLIGSVI
RLWDIIGVDQEDKGENSIILRPSEHMMFPTYPGLPEDGVTVTFDRDTALSRDDIALITQE
HPLVQTGLDLITGSETGTTSVAVLKNKALPAGTLFLELIYMADASAPKSSQLYRYLPPTP
IRILLDKNGNDLSAKVDYASFDKQLSAVNRHIGGKLVTASQPILHPLFAKGEEYAQAAVD
ELVIQAREKMTTQLTGELDRLESLKAVNPNIREEELEYLRNQMQELNTYLDASQLQLDAI
RMVLVSHV
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccgttcgccttaggtcaacgttggataagtgataccgagtcagagcttggtttagga
actgtggttcaagtagaaggccgtatggtcacggtgttattccctgcaacgggtgagaat
cgcatgttctcccgagcagaagcccctctgacacgcgtcacctataattccggcgatacg
gttgaaagccacgaaggttggagcttaaccattgaagagcttactgaaaaagacggctta
gtgatttatcacggtattcatagtgaaacgggcgagcaagttactctgcgcgaaactttg
ttaaatcacaatattcgctttaataaaccccaagaccgtttgtttgccggccaaattgac
cgtctggatcgttttggtgtgcgttatcagtgccaaatgctacgccataaactggcaacc
tctgatttactcggtctgcaaggtccgcgagttggcctgatcccacaccaaatgtggatt
gcccatgaagtcggccgccgttatgcaccgcgggtattactcgccgacgaagtgggttta
ggcaaaaccattgaggcaggcctgattattcatcaacaactgttgaccggtcgcgccgag
cgagtactcgttatcgtccctgatactctgcgtcaccagtggttagtcgaaatgctacgc
cgttttaacctgcgtttttcagtgtttgatgaagaccgttgtgtggaagcctacgccgac
catgacaaccctttctatacagaacagttagtgatttgttcactcgaattactgcgtaaa
aagaaacgcctcgatcaagccttagatgccgattgggatttattagtcgtcgatgaggcg
catcatttagagtggaccgaagaagcaccaagccgtgcctaccaagtggttgaagcttta
agtgaagtcgtgcccggcgtattactattaacggcaacgccagatcaactcggccacgaa
agccactttgcgcgtttgcgtctgctcgatccagatcgtttctacgattacgatgccttc
ctcgccgaagaagacagctataaagatgtcgctatggccgcagaagcgctcgcgggcaac
gcaaaattacccgatgcagcgattaatagcctgaccgaattactcagcgaaaaagacata
gcgccgagcattcgcttaatccaagccgacggcatagatagcgaactacaacaggccgcc
cgcagcgaattactgcaagaactgctcgaccgtcacggcacgggtcgcgtgctctaccgt
aacagccgcgcctcggtaaaaggctttccaaagcgcttttttaatccgcatcctcaaacc
atgccagagcaatacctcacagctgcgcgcgtgagtagtatgatgggcgggcataaaacc
ttagaggccaaagctgcgcaagccttaagccctgaaaaactgtatcaagaatttgaagat
aacagcgccagttggtggaaattcgatccccgtgtggattggttgatcgcgtttttaaaa
tcccaccgcagtaagaaagtgcttatcatcgctagccaagcggaaactgcactcagcctt
gaagaagccctgagaaccagagaaggtattcaagcaaccgtattccacgaaggcatgtcg
attatcgagcgcgataaagcgggcgcttactttgcccaagaggaaggtggcgcacaggca
ctgatctgttctgaaattggctcagaaggtcgtaatttccagtttgccagccacttagta
ctgttcgatttaccgctcaaccctgacttgctagaacaacgtatcgggcgtttagatcgt
atcggtcaaaaaaatgatatccaaattcacttgccctaccttgaagataccgcccaagaa
cgcctaatgcagtggtatcaccaagggctcaatgcctttgaactcacttgcccaagcggc
catgtgctttacgctgaatttgctgaagatttgctcaatgtacttgtgggtgatgacgcg
gatgaactcacgaatctgctcaaccatactcagacccgctataaagaactcaagcacgcc
atggaacagggccgcgataagctgctggaaatcaactcccacggtggcgatagggcaaag
gccattgttgagcgtcttgcccaaaacgatgagaacacccaactcattggatcagtgatc
cgtctatgggacattattggtgtcgatcaagaggataagggtgagaattccattatcctg
cgcccgagtgaacatatgatgttcccaacataccctggcttgccagaagatggcgtaact
gtgacctttgaccgcgacacagcactttcgcgtgatgatattgcgctgatcacccaagaa
catccattagtgcaaacgggcttagatttgatcacaggctcagaaacgggcactaccagt
gtcgcagtattgaaaaataaagccctccctgctggcacattattcttagaactcatctac
atggccgatgcttctgcgcctaagtcgagccagttataccgttacttaccacccacacct
atccgcatcttgctggataaaaatgggaatgatctgtcggccaaagtggattacgccagc
tttgataagcaactgagtgcggtaaatcggcatatcggcggaaagttagtgactgcatca
caaccaatcttgcatccactgtttgccaaaggtgaagaatacgcacaggccgctgttgat
gagttagtgatacaagcgcgtgagaaaatgacaacacaactcacgggagaattagaccgc
ttagagtccctcaaagccgtcaaccccaatattcgtgaagaagagttggaatatctgcgt
aaccaaatgcaagaactcaacacctatcttgacgccagtcagctacagcttgatgccatt
cgtatggtattggtcagccatgtgtaa
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