Shewanella putrefaciens CN-32: Sputcn32_3444
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Entry
Sputcn32_3444 CDS
T00513
Name
(GenBank) transcriptional regulator, Fis family
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
spc
Shewanella putrefaciens CN-32
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spc03000
]
Sputcn32_3444
03036 Chromosome and associated proteins [BR:
spc03036
]
Sputcn32_3444
03400 DNA repair and recombination proteins [BR:
spc03400
]
Sputcn32_3444
Transcription factors [BR:
spc03000
]
Prokaryotic type
Helix-turn-helix
Other families
Sputcn32_3444
Chromosome and associated proteins [BR:
spc03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Sputcn32_3444
DNA repair and recombination proteins [BR:
spc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Sputcn32_3444
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_8
Fis_N
DCAF17
HTH_30
Xre-like-HTH
Phage_NinH
UBL
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ABP77154
UniProt:
A4YB21
LinkDB
All DBs
Position
4015066..4015371
Genome browser
AA seq
101 aa
AA seq
DB search
MFDQTTNTEVHQLTVGKIETANGTIKPQLLRDAVKRAVTNFFAQLDGQEAQEVYEMVLSE
VEAPLLDIIMQHTRGNQTRAANMLGINRGTLRKKLKKYGMN
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatcagacaactaatacagaagttcaccagcttaccgttggcaaaatcgaaacc
gcaaacggcactatcaagccccagttattacgtgacgcagtgaaacgtgccgtaactaac
ttcttcgcacagttggacggtcaggaagcacaggaagtttatgaaatggtgctaagcgaa
gtagaagcgcctctgcttgacatcatcatgcaacacactcgtggcaaccaaacccgcgca
gcaaacatgctaggtatcaaccgtggtactctgcgtaaaaaattgaaaaaatacggcatg
aactaa
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