Shewanella putrefaciens CN-32: Sputcn32_3478
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Entry
Sputcn32_3478 CDS
T00513
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
KO
K10943
two-component system, response regulator FlrC
Organism
spc
Shewanella putrefaciens CN-32
Pathway
spc02020
Two-component system
spc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Sputcn32_3478
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Sputcn32_3478
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
spc02022
]
Sputcn32_3478
02035 Bacterial motility proteins [BR:
spc02035
]
Sputcn32_3478
Two-component system [BR:
spc02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
Sputcn32_3478
Bacterial motility proteins [BR:
spc02035
]
Flagellar system
Flagellar assembly proteins
Others
Sputcn32_3478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
HTH_8
AAA_16
AAA_2
AAA
MCM
AAA_3
AAA_19
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ABP77188
UniProt:
A4YB55
LinkDB
All DBs
Position
complement(4041758..4043068)
Genome browser
AA seq
436 aa
AA seq
DB search
MRSLSIRIEGLNLSADLICKIMHENFCLWNDKMDLPWLTIVNLSDCSPSDVKDYLARFPS
RNQLALLAPEQGELAAAAMRAGVQDYLLIPVESEQLLASIHRLRRLELPDSSLVVSASVS
RQLLMLAHRAATTEASVLLLGESGTGKEPLARYIHRHSSRSHKPFIAINCAAIPESILES
VLFGHVKGAFTGAICDKAGKFEQANGGTLLLDEIGEMPLTLQAKLLRVLQEREVERLGGQ
HAIALDIRIIASTNRDLRQAVELGHFREDLFYRLDVLPLKISPLRDRKADILPLAEHFLD
LYHQPDTTSTCYFSEHAKQALVSYDWPGNVRELENCIQRALVMRRGLAIQAADLGLNIQL
EVQAVEHPEVTDGLRASKQQAEFQYIIDVLKRFNGQRTLSAQALGMTTRALRYRLVQMRE
AGIDIEMLLEQAGRAA
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
gtgagaagcctaagtatacggattgaagggctaaatctatcggcggatcttatatgcaaa
ataatgcatgaaaatttttgcctttggaatgataaaatggacttgccttggctcacaatc
gtcaatctttctgattgtagtcctagtgacgtaaaggattatctcgctcgtttccctagt
cgtaaccagcttgctttgttggcgccagaacaaggtgagttagccgccgcagcgatgcgt
gctggcgttcaagactatttattaattcccgtagaaagtgagcaattgctcgcgtctatt
catcgattacgacggttagagttacctgactctagtttggtggtatcggcatctgtcagt
cggcagttgttgatgctcgcccatcgcgcagcaaccactgaagccagcgttctattactg
ggcgaaagtggtacaggcaaagaacctctcgctcgttatattcaccgtcattcttcgcgt
tcacataaaccttttattgcgattaattgtgctgcaattccagaaagtatccttgagtcc
gtattgtttgggcacgtaaaaggcgcctttacaggtgcaatttgtgataaggccgggaaa
tttgagcaagccaatggcggtacgttattgctcgatgaaattggtgaaatgcctttgacg
ttgcaggcgaaattactgcgagttttgcaggaaagagaagtggaaaggctgggtgggcag
catgcaatagcgttagatatcaggataattgcgtctactaatcgtgacttaaggcaggca
gtagagctcggccatttcagagaagacttattttatcgtttagatgttttaccgttgaaa
atttctcctttaagagatcgaaaggcagatattttgcctcttgctgagcacttcttggac
ttatatcaccagccagataccaccagtacttgttattttagtgagcacgcaaagcaagcc
cttgtgtcctatgattggcccggaaacgtaagggaattagaaaattgtatccagcgggca
ttggtgatgcgtcgtgggcttgcaatacaagctgccgatcttggcttaaacattcagcta
gaagtgcaggcggttgagcatccagaagtgactgatggacttagggcttcaaagcagcag
gcggagttccaatatattatcgacgtacttaagcgtttcaatgggcaacgtaccttaagt
gcacaggcgttagggatgacgacgagagcgttaagatatcgactcgtacaaatgcgggaa
gcagggattgatattgaaatgttattagaacaagcgggccgcgctgcttag
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