Shewanella putrefaciens CN-32: Sputcn32_3580
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Entry
Sputcn32_3580 CDS
T00513
Name
(GenBank) tyrosine recombinase XerC
KO
K03733
integrase/recombinase XerC
Organism
spc
Shewanella putrefaciens CN-32
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spc03036
]
Sputcn32_3580
Chromosome and associated proteins [BR:
spc03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
Sputcn32_3580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_5
DUF3435
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
ABP77288
UniProt:
A4YBF5
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All DBs
Position
complement(4158092..4159000)
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AA seq
302 aa
AA seq
DB search
MGDMSDLEVTCLQDYERYLHSERQLSAHTVHNYLYELNRVSTLLPKDVTLLNVGREHWQQ
VLAKLHRKGLSPRSLSLCLSAIKQWGEFLLREGMIAVNPAKGLSAPKQAKPLPKNMDVDS
LTHLLEIEGTDPLTLRDKAMMELFYSSGLRLAELAALNLSSVQYDLREVRVLGKGNKERI
VPVGSYAIKALEAWLVCRQQIPCEDCALFVTGKGRRLSHRSIQSRMAKWGQEQALSVRVH
PHKLRHSFATHMLESSADLRAVQELLGHANLSTTQIYTSLDFQHLAKVYDSAHPRAKKQQ
DK
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatatgtcggacctcgaagtgacatgcctgcaggactatgagcgttatttacat
tcagagcggcagttgtcggctcacactgtgcataactatctctatgaactaaatcgtgtt
agtacgctattacctaaagacgttaccttacttaatgtgggtcgagagcattggcaacaa
gtgctcgcaaaattacaccgcaaaggcttgagccctcgctcgctttccttgtgtttatct
gcgatcaaacagtggggtgagtttttactgcgggaagggatgatagcggttaatccagcc
aaaggactcagtgcacctaaacaagccaagccactgcctaaaaatatggatgtcgattcc
cttactcatttacttgaaattgaaggtacagatcccttaacgctgcgagataaagccatg
atggaattgttttattccagcggattacgtcttgccgagttagcagcactcaatttatca
agtgtacagtacgatctgcgtgaagttagagtattaggtaaaggcaataaagagcgtatt
gtgccagtaggcagttatgccattaaggcattagaggcatggcttgtatgtcgtcagcaa
attccttgcgaagattgtgcattgtttgtaacgggaaaaggtagacgattatctcatcgg
agtatccagtcgcggatggcaaagtgggggcaggaacaagcgttatcagtgcgagtccat
ccccataaattacgtcattcttttgcgactcatatgttggagtcgagtgccgatctgcgt
gcagtgcaggaattattaggccacgcaaacctctcaacgacacaaatttataccagtcta
gatttccaacatcttgcgaaggtgtatgatagcgcccatcctagagcgaaaaaacagcag
gataaataa
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