Shewanella putrefaciens CN-32: Sputcn32_3583
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Entry
Sputcn32_3583 CDS
T00513
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
spc
Shewanella putrefaciens CN-32
Pathway
spc00300
Lysine biosynthesis
spc00470
D-Amino acid metabolism
spc01100
Metabolic pathways
spc01110
Biosynthesis of secondary metabolites
spc01120
Microbial metabolism in diverse environments
spc01230
Biosynthesis of amino acids
Module
spc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Sputcn32_3583
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Sputcn32_3583
Enzymes [BR:
spc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Sputcn32_3583
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Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
ABP77291
UniProt:
A4YBF8
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All DBs
Position
complement(4160619..4161863)
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AA seq
414 aa
AA seq
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MDHFLYHNNALHAEGCQVADLAKTYGTPLYIYSRATLERHWHAFNNAVMDHPHLICYAVK
ANANLAVLNVLARLGSGFDIVSGGELARVIEAGGSPAKVVFSGVGKTVAEMEQALNLGIY
CFNVESSAELEQLNLVAGRLGKVAPVSLRINPDVDAGTHPYISTGLKENKFGIAMDEAEI
VFARAHALPHLKVKGVDCHIGSQLTEIQPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGL
GVTYDDETPPHPDVYAAALLKRLGNRKLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRF
AIVDGAMNDLIRPALYSAWQNIIPVAPRDSEAYEFDIVGPVCETGDFLGKERKLALAAGD
LLAVRSSGAYGFAMASNYNTRPRAAEVMVDGEHAFLVREREKISQLWQGEQLLP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttggatcactttctctaccataataatgccctgcacgccgaaggctgtcaggttgctgat
ttagccaaaacctatggcacaccactatatatatattcccgtgcgacacttgagcgccat
tggcatgcttttaataatgccgttatggatcatccacacctcatttgttatgcggtcaaa
gccaacgctaacttggccgtactgaatgtgctggcacgtttaggcagtggttttgatatt
gtgtctggcggtgagttggcaagggttatcgaagcaggaggctcccccgctaaagtggtg
ttttctggtgtgggaaaaaccgttgccgagatggagcaagcgcttaatctgggtatttac
tgttttaacgtcgaatcaagcgccgagcttgagcagttaaatctggttgcgggtcgttta
ggtaaagtagcacccgtttcattgcggattaatcccgatgtggatgcaggaacccatccc
tatatttcgaccggccttaaggaaaacaaatttggcattgctatggatgaggctgaaatt
gttttcgcccgtgcccatgcgttaccacatctaaaagtgaaaggtgtcgattgtcatatc
gggtcacaactcactgagatccaaccatttcttgatgcaatggatcgtatgctggcgctc
atagatcgtctggctgagcaaggaattgttatcgaacatttcgatgtaggcggtggttta
ggagtgacctatgatgatgaaacgccaccacatcccgatgtatatgcggctgcgttactc
aagcgtttaggcaaccgtaaacttaaactgattttcgagcctggccgtgcgattgcagct
aatgcggggatttttgtcactcaggtgctttatctgaaagaaaacagcgacaagcgtttt
gcgattgtcgatggcgcgatgaatgacctaattcgccccgcactttatagtgcatggcaa
aatattatcccagtagcgccaagagactctgaggcctatgaatttgatattgtaggccct
gtgtgtgaaacaggcgattttctaggtaaagaacgcaagctggctttagctgctggcgat
ctacttgcggtgcgttcaagtggtgcctatggttttgctatggcatccaattacaatact
cgtccccgtgcggctgaagtgatggtcgatggcgagcacgctttcttagtgcgtgagcga
gaaaaaatatctcaactctggcaaggtgagcaactcctgccgtaa
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