Shewanella putrefaciens CN-32: Sputcn32_3634
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Entry
Sputcn32_3634 CDS
T00513
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
spc
Shewanella putrefaciens CN-32
Pathway
spc00061
Fatty acid biosynthesis
spc00071
Fatty acid degradation
spc01100
Metabolic pathways
spc01212
Fatty acid metabolism
spc02024
Quorum sensing
spc04146
Peroxisome
Module
spc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Sputcn32_3634
00071 Fatty acid degradation
Sputcn32_3634
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Sputcn32_3634
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sputcn32_3634
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spc01004
]
Sputcn32_3634
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spc04147
]
Sputcn32_3634
Enzymes [BR:
spc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Sputcn32_3634
Lipid biosynthesis proteins [BR:
spc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Sputcn32_3634
Exosome [BR:
spc04147
]
Exosomal proteins
Exosomal proteins of breast milk
Sputcn32_3634
Exosomal proteins of breast cancer cells
Sputcn32_3634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
SH3_1
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABP77342
UniProt:
A4YBK9
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All DBs
Position
4234173..4235837
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AA seq
554 aa
AA seq
DB search
MDTAIKTPIEMLAHWAKARGDEVYLRQPIKGQYLDFTWGEVQEKVQQLAGALRHLGFESG
DKIAVLSKNCAEWFITDLALMHGGYISVPIYPTANPDTIRYVLQHSGAKAIFVGKLDHWA
DQEAGVGGELLRLAMPYDTMPAQYQWEQLLNLGHPLIEAPLPKLDQVMTLIYTSGSTGQP
KGAIQTFASYGWTCKAVVRDLRTDGDDRLLSYLPLAHITERVAIEGSSFYSGSSVAFVES
LDSFVADVQRAKPTVFFSVPRLWSLFQKNIIDKIGLSKLNLLLKIPLLSSFVKYKIHKGL
GLNHCRLLGSGSAPIPPSLIHWYHNIGLNICEAWGMTENCAYSIINYPFDARKIGTVGRP
IQDCLIRQGDDGELLIKSPGLMTAYYLQPEATAAAFDADGFFHTGDLCAIDADGCVTITG
RVKDNFKTAKGKYVAPVPIERKLAQDPYVELICVIGSGLPHPVALVQLSEGASLQAREEV
RASLKATLDSVNPHLESHEHVDAIIVVSDPWTIENDVLTPTLKIKRHVLEKAFSERVDGI
RGAKICWEDEISIK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggatactgcgattaagacaccaatcgaaatgctggcacactgggctaaagctcgtggg
gatgaagtctatttgcgccaaccaatcaagggacaataccttgattttacgtggggtgaa
gtgcaagagaaagtgcagcaattagcgggggcgctacgtcacttaggatttgagtctggc
gataaaattgccgtcttatctaaaaactgtgcagagtggtttatcaccgatctcgccttg
atgcacggcggctatatcagcgtgccaatttacccgaccgccaaccctgataccatacgt
tatgtgctacaacacagtggggctaaagccatttttgtcggtaagctcgatcattgggcc
gatcaagaagctggggttggtggagaattattacgcctagcaatgccctacgacactatg
cccgcccaatatcaatgggaacaattgctaaatcttggtcatcctttaattgaagctccc
ctacctaagctagaccaagtgatgacattgatctacacctcaggttcgacagggcagcct
aaaggtgccattcagacctttgctagctacggctggacctgtaaagccgttgtacgtgac
ttacgcaccgatggtgatgatagactcttatcctatctgccattagcccatatcactgaa
cgcgttgcgattgaaggctcatccttttattcgggtagctccgttgcctttgttgaaagc
ctcgactcctttgtcgccgatgtgcaacgggctaaaccgacggtgtttttctccgttcca
cgcctgtggagcctgttccagaaaaatatcatcgataaaattggcttaagcaaactcaac
ctgttactgaaaattccgctacttagcagttttgtaaaatacaaaattcacaagggatta
ggtttaaaccattgtcgcctgctcggctcaggatctgcgcctattccaccatcattgatc
cactggtatcacaatattggcctcaatatttgtgaggcttggggaatgacggaaaactgc
gcctattcgattatcaactatccctttgatgcccgtaaaattggtactgttggacgtcca
atacaggattgcttaatacgccaaggggacgatggcgagttactgatcaaaagccccggt
ttaatgaccgcctattatttacaacccgaagcgactgcggcagccttcgatgccgatggt
tttttccatactggcgatttatgtgccatcgatgccgatggctgcgtgactattactggt
cgtgttaaagacaattttaaaaccgccaaaggtaaatatgtcgcgccagttcctattgaa
cgtaaattagctcaggatccctatgtagaactgatttgcgttattggctctggtttgcca
catcctgtcgcactggtacaactatcagaaggggcaagcctacaagcccgtgaagaagtg
agagcctcactgaaagcaacactcgacagtgttaacccacacttagagtcccatgaacat
gtcgatgcaattatcgtggtcagtgatccttggacaattgagaatgatgtactcacccct
accctcaaaatcaaacgtcatgtgcttgaaaaagcctttagcgaacgagtcgatggcatt
agaggcgctaaaatatgttgggaagatgagatttctattaaataa
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