Shewanella putrefaciens CN-32: Sputcn32_3804
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Entry
Sputcn32_3804 CDS
T00513
Name
(GenBank) RNA binding S1 domain protein
KO
K06959
protein Tex
Organism
spc
Shewanella putrefaciens CN-32
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
Sputcn32_3804
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
YqgF
HHH_7
S1_RRP5
T2SSK
HHH_6
PsbU
ArdA
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ABP77511
UniProt:
A4YC28
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Position
complement(4415097..4417538)
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AA seq
813 aa
AA seq
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MKLIMRLWYRGRNYDSSVKHDILFMQTTSQTIAHNIAQIIAQELNVREQQVTATIALLDD
GATVPFVARYRKEATGGLDDTQLRTLHSRLAYLRELNDRRQVILSSIQAQGKLTAELQFA
IDSADSKTRLEDLYLPFKPKRRTKGQIAIEAGLEPLADALLADRHADIEELAADYINENA
GFADTKAVLEGARYILMERYAEDAELLRKVREHLSQNSVLESRVIAGKEKEGAKFRDYFE
HNELLSKVPSHRALAMLRGRNEGFLSLSMNADPNAQAGQGSYCEVIIADHLGLKLGDSSV
DQWLKTVVTATWRIKIALQMETEFISQMRERAEAEAIKVFARNLGDLLMAAPAGAKATMG
LDPGLRTGVKVAVVDNTGKLLSHATIFPHAPQNLWEKSIRTLANLVNMHKVELIAIGNGT
ASRETDKLAAELIASIKDTHPHLTKVMVSEAGASVYSASELAALEFPELDVSIRGAVSIA
RRLQDPLAELVKIEPKSIGVGQYQHDVSQSQLSSSLEAVVEDCVNGVGVDLNMASVPLLS
QVAGLNKTLAKNVVDYRDANGQFKNRKELLKVPRLGPKAYEQAAGFLRIREGDNPLDMSA
VHPEAYSLVETIAKAKQVELASLIGNSELLRTINAQEFITPEFGLPTVTDILAELDKPGR
DPRGEFKTAKFKEGIEELKHLKPEMILEGVVTNVTNFGAFVDIGVHQDGLVHISSLTDKF
ISDPHTVVKAGDVVKVKVMEVDVERRRIGLSMRLDEAIEQNNAQVKHSSQTKANHKLTSS
GKTARPAQKPAPKAPANAAMGNAFADAFAKLKK
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgatcatgcgcctgtggtatcgtgggcgcaattacgactcatccgttaaacac
gatattttatttatgcaaacgacttcccaaaccattgcacataacatcgctcaaatcatt
gcccaagaactgaatgttcgtgagcagcaagttaccgcgaccatagcattgctcgacgat
ggggctaccgttccttttgtggcgcgctaccgtaaagaagctaccggtggcttagacgat
acccaattacgtaccctacatagtcgtttagcctatctgcgagagttgaacgatagacgc
caagtgattttgtccagtattcaggctcaaggtaaattaaccgcagagctgcaatttgct
attgatagtgccgacagtaagactcgcctcgaagatctctatttacccttcaaacctaag
cgccgtactaaagggcaaatcgccattgaagcgggccttgaaccattagccgatgcactg
cttgcggatcgtcatgccgatatagaagaactggctgcggattatatcaatgaaaatgct
ggttttgccgatactaaagccgtgctcgaaggtgctcgttatattttgatggaacgctac
gccgaagatgcggaactattgcgcaaagtgcgtgagcatttaagccaaaacagcgtatta
gaaagccgtgtgatcgcgggtaaagaaaaagagggcgctaagttccgtgactatttcgag
cacaatgagttgttatctaaagtgccgtcacaccgcgctttagctatgttacgtggtcgc
aatgaaggctttttatccttatcaatgaatgccgaccctaatgcacaagcaggtcaaggc
agttactgtgaagtgattattgcagaccatttaggtttgaaactgggtgatagtagtgtt
gatcaatggttaaaaaccgtagtaacggcgacatggcgtatcaaaattgcattgcaaatg
gagaccgagtttatttcgcaaatgcgtgaacgcgctgaagccgaagccattaaggtcttt
gcccgtaacttgggcgatttactgatggcggcccccgctggtgcaaaagccaccatggga
ctcgatcctggtttacgtactggtgttaaagtggctgtggttgataacacgggtaagctc
cttagccatgcgacaattttcccccatgcaccgcaaaatttatgggaaaaatcgattcgt
actttagccaaccttgtgaatatgcataaggttgaactgatcgcaattggtaacggtacc
gcctcccgcgaaactgacaaacttgctgccgaattaattgccagtataaaagatacccat
ccacatctcaccaaggtcatggtgagtgaagcgggtgcctcggtttattcggcatcggag
ttggccgcactcgaatttccggaactcgatgtctctattcgcggtgcagtttctatcgcc
cgccgtctgcaagatcctctggctgagttagtgaaaattgagcctaagtctatcggagtc
ggtcaatatcagcacgatgtcagtcaaagccaattatctagctcgcttgaagccgtagtc
gaagactgtgtaaacggtgtgggtgttgatttgaatatggcttcagtgccgttattgtcg
caagtggctggtttaaataagaccttagcgaaaaatgtggtcgattaccgcgatgccaat
ggtcagtttaaaaaccgtaaagagctacttaaagtgcctcgtttagggcccaaggcttat
gagcaagcggcggggtttttacgcattcgtgaaggagataatccgctcgatatgtctgcc
gtgcatcctgaagcttattcgctggtggaaaccatagccaaagctaaacaggttgaatta
gcaagtcttattggtaactcagaactgttacgaacgattaatgcacaggagtttatcacg
ccggaatttggtctccctaccgtgaccgatattttagccgagctggataaaccgggacgc
gatccccgcggtgagtttaaaaccgctaagtttaaagaggggattgaagaacttaagcat
ctcaaacccgaaatgatcctcgaaggtgtagtgacgaacgtgactaactttggtgccttt
gtcgatatcggtgtgcatcaagacggtttagtccatatttcttcattgaccgacaaattt
atcagcgatccccacacagtggtgaaagcgggtgatgtggtgaaggttaaagtgatggaa
gtggacgttgagcgccgtcgtattggtttgagtatgcgtttggacgaggcgattgaacaa
aacaatgctcaggttaagcattcatcgcaaaccaaagccaatcacaaattgacttcgtca
ggtaaaaccgctcgcccagctcaaaagccagcgccgaaagcgcccgcgaatgcggctatg
ggtaacgcttttgccgatgctttcgctaaactgaaaaagtaa
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