Sphingobium sp. CAP-1: GL174_01185
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Entry
GL174_01185 CDS
T10467
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
spca Sphingobium sp. CAP-1
Pathway
spca00362
Benzoate degradation
spca00624
Polycyclic aromatic hydrocarbon degradation
spca01100
Metabolic pathways
spca01120
Microbial metabolism in diverse environments
spca01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
spca00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
GL174_01185 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
GL174_01185 (pcaH)
Enzymes [BR:
spca01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
GL174_01185 (pcaH)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
NOMO1-like_2nd
DUF4198
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
QGP77761
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Position
MIN1:242659..243372
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AA seq
237 aa
AA seq
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MTTDIAYAPDDAGLPPLLYPEYRSTGLRSPRHPLVNAPQTLTEVSGPSGCWSALMGQAEV
DLTSQHGSAPHGQRIRISGRVLDDSGRPVPNTIVEIWQANAAGRYIHRNDNWDAPLDPNF
TGAGRVITDDQGWYSFTTIRPGAYPWGNHHNAWRPAHIHLSLLGPAFATRLVTQIYFPDD
PLIEIDPIANAVPMPYRNRLICRFDIDTTIANWALGYRFDIVLKGAMQTPFEGTANG
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
gtgacaacggacatcgcatatgcgcctgacgacgcgggcttgccaccactcctctaccca
gagtatcgctcgaccggattgcgtagtccgcgtcaccccttggtcaacgctccgcagact
ttgactgaggtgagcggccccagcggttgctggagcgctcttatgggtcaagccgaggta
gacctaacgtcgcaacatggatctgctccccatggccagcgcatccgcatctctggcagg
gtgctggatgacagtggtcgtccggtaccaaacaccatcgtcgaaatctggcaggcgaac
gcggccgggcggtatatccatcgcaacgataattgggacgcgccgctcgatccgaacttc
accggagctggtcgggtgattaccgatgatcagggctggtattccttcacgaccatccgg
cccggagcttacccttggggtaaccatcacaatgcatggcgcccggctcatattcacctg
tcgttgcttggccccgccttcgccactcgtctcgtcacccaaatctactttcctgacgat
ccattgatcgagatcgatccgatcgcgaatgcggttccgatgccgtatcgcaatcgcctc
atctgccggtttgatatcgacacgaccatcgccaactgggcgctcggataccgttttgac
atcgtgctgaagggggcaatgcagacgcccttcgagggtactgccaatggataa
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