Sphingobium sp. CAP-1: GL174_01795
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Entry
GL174_01795 CDS
T10467
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
spca Sphingobium sp. CAP-1
Pathway
spca03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spca00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GL174_01795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spca03021
]
GL174_01795
03400 DNA repair and recombination proteins [BR:
spca03400
]
GL174_01795
Enzymes [BR:
spca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GL174_01795
Transcription machinery [BR:
spca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GL174_01795
DNA repair and recombination proteins [BR:
spca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GL174_01795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
QGP77871
UniProt:
A0A6I5YMC3
LinkDB
All DBs
Position
MIN1:353742..354086
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AA seq
114 aa
AA seq
DB search
MARVTVEDCVDKITNRFDLVLLAAQRAREISGGAELTLDRDRDKNPVVALREIAEETVLP
ADLHDSVVASLQKVQIDDDDTPDEIGSIAQSAEALRLTAAAPPRNQNIGGDYDG
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
ttggcccgcgttaccgtcgaagattgcgtcgacaagattaccaaccgtttcgacctcgtc
ctgctcgccgcccagcgcgcgcgggagatttccggcggcgccgagctgacgcttgaccgc
gatcgtgacaagaatccggtcgtcgcgctgcgggaaatcgccgaggaaaccgttctgcct
gccgatcttcacgattcggtcgtcgcgtcgctgcaaaaggtgcagatcgatgatgacgac
acgccggacgaaatcggctcgatcgcccagtcggcggaggcgctgcgcctgaccgccgcc
gcgccgccgcgcaaccagaatatcggcggcgactacgacggctga
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