Sphingobium sp. CAP-1: GL174_01985
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Entry
GL174_01985 CDS
T10467
Name
(GenBank) TlyA family rRNA (cytidine-2'-O)-methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
spca Sphingobium sp. CAP-1
Brite
KEGG Orthology (KO) [BR:
spca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spca03009
]
GL174_01985
Enzymes [BR:
spca01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
GL174_01985
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
GL174_01985
Ribosome biogenesis [BR:
spca03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
GL174_01985
23S rRNA modification factors
GL174_01985
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_11
Methyltransf_24
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
QGP77904
LinkDB
All DBs
Position
MIN1:394085..394822
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AA seq
245 aa
AA seq
DB search
MAKIRADQLLVDNGLAESKARAQALILAGLVFLGDRKIEKAGQQVGVDADLDVRGRDHPW
VSRGGIKLAHALEAFAIDVTGFVAIDVGSSTGGFTDVLLTNGAAKVYAVDSGTNQLAWKL
RSDDRVIVHEQTSARILTDAHIPEPVDIIVCDASFIALSKVLEKPIGFAKPGARMVALIK
PQFEARREEVGKNGVIRDPAVHERVCAEVKDWAVAQGWTIAGLTPSPITGPQGNVEFLLY
ARLGG
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaattcgcgctgatcagttgctggtcgataacggccttgccgaaagcaaggcg
cgtgcgcaggcgctgatcctcgccggcctcgtctttctgggcgatcgcaagatcgagaaa
gcagggcagcaggtcggcgtcgacgccgatctcgacgtgcgcggccgcgaccatccctgg
gtgtcgcgcggcggcatcaagctggcccacgcgctggaagcattcgccatcgacgttacc
ggcttcgtcgccatcgatgtcggctcctcgaccggcggctttaccgacgtgctgctgacc
aacggcgcggcgaaagtctatgcggtcgacagcggcaccaaccagctcgcctggaaactc
cgctccgacgatcgggtcatcgtccatgaacagaccagcgcccgcatcctgaccgacgcg
catatccccgaacccgtcgacatcatcgtctgcgacgccagcttcattgcgctgtccaag
gtgctggaaaagccgatcggcttcgcgaaacccggcgcgcggatggtcgcgctcatcaaa
ccccagttcgaggcgcggcgcgaggaagtgggcaagaatggcgtgatccgcgaccctgcg
gtgcatgaacgcgtctgtgccgaagtaaaggattgggcggtggcgcagggctggactatc
gccggtctgacgccaagcccgatcaccggaccgcagggcaatgtcgaatttctgctctac
gcccggcttggtggataa
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integrated database retrieval system
