Sphingobium sp. CAP-1: GL174_02985
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Entry
GL174_02985 CDS
T10467
Name
(GenBank) TonB-dependent receptor plug domain-containing protein
KO
K02014
iron complex outermembrane recepter protein
Organism
spca Sphingobium sp. CAP-1
Brite
KEGG Orthology (KO) [BR:
spca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spca02000
]
GL174_02985
Transporters [BR:
spca02000
]
Other transporters
Pores ion channels [TC:
1
]
GL174_02985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Lipoprotein_2
Motif
Other DBs
NCBI-ProteinID:
QGP78079
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Position
MIN1:602375..604828
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AA seq
817 aa
AA seq
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MRSILLASTAIAGAVTGMMVAVSVQAQTADQAGQDSGLAEIVVTAQRKEESVQKAAVAID
AVTGNDLLQQGISKAEDITKTVPAISITNGGGSNTSIFIRGVGNITSSSYNDPAVTPSYD
GVVLARAAGAFGSAFYDLARVEVLKGPQGILYGRNATGGAVNIIPARPELGKNGAGFNFS
YGNYDAVNVDGYVNLSTSDNSALRFAATRQVHDGYNRDGSDDLDRSGLRGQFLIEPSDAV
SLRIGADWTKVSGVGPGGSYIGSFTPGASGYTFTAAPFDTSEGYNTDAANAYRQTLLGAP
GFGFLDAMNQQQSVDYTYWGVNAELNWKTDIGTFTLIPAYRQSKGQTYFYGPAFNTAYNW
EKDSQTSLEARLAGSAGMIDYVLGGFYFNEKIQADNEYNQEFVLPIQHYTHKTKSWALFG
QLTANVTDRFRLVGGARYTHDKKSMDGIINNFITFCGGLPPANITPPASFAAGCAAPGAL
PHYPNFLTTGDTVNWLASNGWIAAGSTDQANTQVFALLNGAGTILKTYNPVVDSGTYSRV
TWKASAQFDVTPQNLLYATVETGYRAGGFQLAEGKSRYDPEFITAYTIGSKNRFFNNRVQ
LNLEGFYWKYKDQQITYFTVDTSGTLINSNENAGKATIKGFDVDAVVKATRTTTLNAKVQ
YLKATYDDLHLYTASPRDNINCSYSLTGATAGGAPVKDFNCSGKPLLFSPKWTVNLGAEQ
VVPLTDRLELVGNVATAWRASQYGAFEYLDFERIPAYWQTDLNLTLRSSDGGWSIGGFVY
NLEDKRRIATPQRSPIGMAVARFTAPRTYGLRLSAEF
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagcatattgttggccagcacggcgattgccggcgccgttacaggaatgatggtc
gccgtatcggtgcaggcgcagaccgccgatcaggccgggcaggattcgggtcttgccgaa
atcgtcgtcacggcccagcgcaaggaggaaagcgtccagaaggcggcggtcgcgatcgac
gccgtcactggcaacgacctgttgcagcagggcatcagcaaggccgaggatatcaccaag
acggtgccggcgatcagcatcaccaatggcggtgggtcgaatacctccatcttcattcgc
ggcgtcggcaatatcacgtcgagcagctataatgatccggcggtcacgcccagctatgat
ggcgtggtgctggcgcgggcggcgggcgccttcggatcggcattttacgacctggcccgt
gtcgaggtgctgaaaggcccgcagggtattctttatggccgcaacgccacgggcggcgcg
gtgaacatcattcccgcgcggccggaactgggcaagaatggcgccgggttcaatttttcc
tacggcaattatgatgcggtcaatgtcgacggctatgtgaacctgtccaccagcgacaac
agcgcgctgcgcttcgcggcgacgcggcaggtgcatgatggctataatcgcgacggcagc
gacgatctcgaccgtagcggcctgcgcggccagttcctgatcgagccgagcgacgcggtc
agcctgcgcatcggcgccgactggaccaaggtgagcggggtcggtccggggggcagctat
atcggctccttcacgccgggggcgtcgggttacaccttcacggcggcgcccttcgacacg
tcggagggatataataccgacgccgccaacgcctatcgccagactttgctgggtgcgccg
ggctttggtttccttgatgcgatgaatcagcaacagtcggtcgactacacctattggggc
gtcaatgcggaactgaactggaaaaccgatatcggcaccttcaccctgatccccgcctat
cgtcagtcaaaggggcagacctatttctatggtcccgccttcaacactgcctataattgg
gaaaaggacagccagaccagtctggaagcgcggctggccggttccgccgggatgatcgac
tatgttctgggcggtttctatttcaatgagaagatccaggcggacaatgaatataatcag
gaattcgtcctgccgatccagcattatacccacaagaccaagagctgggcactgttcggt
cagttgaccgccaatgtcaccgatcgtttccggctggtgggcggcgcacgctatacccat
gacaagaagtcaatggacggcatcatcaacaatttcatcaccttctgcggcgggttgccg
cccgccaatatcacgccgcccgcatccttcgcggccggttgcgcggcgcccggtgccctg
ccgcattatcccaatttcctgacgaccggcgatacggtgaactggctcgcgtccaacggc
tggatcgcggcgggcagcaccgatcaggccaatacgcaggtgttcgcgttgttgaacggc
gccggcacgatcttgaaaacctataatccggtggtggacagcggcacctattcacgggtg
acttggaaggcgtcggcgcagttcgacgtgacaccgcaaaacctgctctatgcgacggtc
gaaacgggctatcgcgccggtggcttccagcttgccgagggcaagtcacgctatgatccc
gaattcatcacggcctacacgatcgggtcgaagaaccgtttcttcaacaatcgggttcaa
ctcaatcttgaggggttctactggaaatataaggaccagcagatcacctatttcaccgtc
gataccagcggcacgttgatcaattcgaacgaaaatgcgggcaaggcgacgatcaagggc
ttcgatgtcgacgccgtggtcaaggcgacgcggacgacgaccctgaatgccaaggtgcag
tatctgaaggcaacctacgacgacctgcacctctataccgcttcgccgcgcgacaatatc
aattgttcctacagcctgacgggggcgacggcgggcggtgcgccggtcaaggatttcaac
tgttcgggcaagcctctgctgttttcgcccaaatggacggtcaatctgggggcggagcag
gtcgtgccgctcaccgacaggctggaactggtcggcaatgtcgcgacggcctggcgcgct
tctcaatatggagcgttcgaatatctcgatttcgaacggattcccgcttattggcagacc
gacctgaacctgacgctgcgctcgtcggatggcggctggtcgatcggcgggttcgtctac
aatctggaggacaagcggcggatcgccacgccgcagcgttcgcccatcggcatggcggtg
gcgcgctttactgcgccgcggacctatggcttgcgcttgtccgccgagttctga
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