KEGG   Sphingobium sp. CAP-1: GL174_03250
Entry
GL174_03250       CDS       T10467                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
spca  Sphingobium sp. CAP-1
Pathway
spca00061  Fatty acid biosynthesis
spca00071  Fatty acid degradation
spca01100  Metabolic pathways
spca01212  Fatty acid metabolism
spca02024  Quorum sensing
spca04146  Peroxisome
Module
spca_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:spca00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    GL174_03250
   00071 Fatty acid degradation
    GL174_03250
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    GL174_03250
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    GL174_03250
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:spca01004]
    GL174_03250
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spca04147]
    GL174_03250
Enzymes [BR:spca01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     GL174_03250
Lipid biosynthesis proteins [BR:spca01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   GL174_03250
Exosome [BR:spca04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   GL174_03250
  Exosomal proteins of breast cancer cells
   GL174_03250
SSDB
Motif
Pfam: AMP-binding AMP-binding_C AMP-binding_C_2 AMP-binding_C_3
Other DBs
NCBI-ProteinID: QGP78120
LinkDB
Position
MIN1:659861..661567
AA seq 568 aa
METMEKIWRERYQHPTVWDQTFPPLSMGAMVERSAKAHPGAAMIDFMGRKFSYGEMLEQI
RRIACGLQAMGVRKGDRVGLYLPNTPHYVAAYYGALMAGAIVVNFSPLYTAAELEHQVED
SGTKILFTLSAKALLPTALKVLEDSTLETLIVGSVAEMLSPVKSLLFRWFKAAETAHLPD
DPRVLRYDRLVANAGDCLVADIDPVNDVALLQYTGGTTGTPKGAMLTHQNLTANARQAQA
IDPHPNEADRIIAVLPFFHVFANTCVLNRTVVNGGEMVMLPRFDAAQVLAAVQRTRATSL
PGVPTMYQALLDHPALRNIDFSSLRACISGGAPLPLEVKQKFEAATGARLIEGYGLTETS
PIVCVNPYEGLNKSGTVGQPVPGTRVKLVDREDPTRPPAEGEPGELLFAGPQIMKGYWNR
PDADAEVFVGDFIRTGDVGIIDEDGYVKIVDRLKDMIAVGGFKVFPSQVEAVLYHHPAVK
EALVIGVPDHYRGEQPKAFVTLNEGFDMDGPGLKDWLNPQMGKHERVCEVEVRQTLPKTL
VGKLSRKELVAEERAKAEAAAQQAGTAA
NT seq 1707 nt   +upstreamnt  +downstreamnt
atggagacgatggaaaaaatctggagagagcgataccagcaccctacggtctgggatcag
acattcccgcccctgtcgatgggcgcgatggtcgagcggagtgcgaaggcgcatccgggc
gccgcgatgatcgacttcatggggcgcaaattcagctatggcgagatgctggagcagatc
cgccggatcgcctgcggattgcaggcgatgggggtgaggaagggcgaccgggtcggcctc
tatctgcccaacacgccccattatgtcgcggcctattatggcgcgctgatggccggagcg
atcgtcgtcaacttctcccccctctataccgccgccgaactggagcatcaggtcgaggac
agcggcaccaagatcctgttcaccctgtcggccaaggcgctgttgccgaccgcgctcaag
gtgctggaggacagcacgctcgaaacgctgatcgtcggatcggtcgcggagatgctgtcg
ccggtcaaatcgttgttgttccgctggttcaaggcggcggagacggcgcacctgcccgat
gacccgcgcgtgttgcgctatgaccggctggtcgccaatgcgggcgattgcctggtggcc
gacatcgatccggtcaatgacgtggctctgctgcaatataccggcggcaccaccggcacg
cccaagggggcgatgctgacgcaccagaatctgaccgccaatgcgcggcaggcgcaggcg
atcgatccgcaccccaatgaagccgatcgcatcattgcggtgctgcccttcttccacgtc
tttgccaatacctgcgtcctcaaccggacggtggtgaatggcggcgagatggtgatgttg
ccccgcttcgacgcggcgcaggtgctggcggcggtgcagcggaccagggcgacatcgctg
ccgggcgtgccgaccatgtatcaggcgctgctggaccatccggcattgcgcaatatcgat
ttttcgtcgctgcgggcctgtatttcgggtggggcgccgttgccgctggaggtgaagcag
aagttcgaggcggcgaccggcgcgcggctgatcgagggttatggcctgaccgaaaccagc
ccgatcgtctgcgtcaatccctatgaggggctgaacaagagcgggacggtggggcagccg
gtgccggggacgcgggtgaagctggtcgatcgcgaggacccgacccggccgccggccgaa
ggcgaaccgggcgaactgctgtttgccgggccgcagatcatgaagggctattggaaccgc
cccgacgcggatgccgaagtgttcgtcggcgacttcatccgcaccggcgatgtcggcatc
atcgacgaggacggctatgtgaagatcgtcgaccggctgaaggacatgatcgcggtcggc
gggttcaaggtgtttccgagccaggtcgaggcggtgctgtatcaccatcccgcggtcaag
gaggcgctggtgatcggcgtgcccgaccattatcgcggcgagcagcccaaggcgttcgtg
acgctgaacgagggcttcgacatggacgggccggggctgaaggactggctgaacccgcaa
atgggcaagcatgagcgggtgtgcgaggtggaggtgcgccagaccctgcccaagacgctg
gtcggcaagctgtcgcgcaaggaactggtggccgaggagcgggcgaaagcggaagcggcg
gcgcagcaggctggaaccgcggcctga

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