Sphingobium sp. CAP-1: GL174_03320
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Entry
GL174_03320 CDS
T10467
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spca Sphingobium sp. CAP-1
Brite
KEGG Orthology (KO) [BR:
spca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spca02000
]
GL174_03320
Transporters [BR:
spca02000
]
Other transporters
Pores ion channels [TC:
1
]
GL174_03320
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
QGP78133
LinkDB
All DBs
Position
MIN1:complement(672938..675763)
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AA seq
941 aa
AA seq
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MRFKSALQCGVVLSVVAWTIPAFAQSTAPQADDGAQIIVTGSRIRQNPLDQDKPIVTVDQ
QAIARTGLTSIADVLQRIPSAAGGLNTKVNNAGNIGGPPDGTGVSSGSAEVDLRYLGAKR
TLILVDGMRYVNGSAAGGIPASVDLNTIPQGMIEKVEVLQSGASPLYGSDAVAGVVNIIT
KQSQKGLDLSAQVGSYRQGDGETYDFNASYGFQSDRVSVIVGGNYVKQMPVRTADRSISL
WPAAGGSSCLDGGCSSATPLGRYDVLDQSLTLKQAVTSRAPVLSDYRNWAGTNVDGFNFA
PYNYLLTPSERYGGFLSAKVDFSDTVSLRSRLVYQHRNSTTQAAFLPLFIGPDAGNGNLL
DTISIDATNPFNPFGVTLSSGADGTPANYSTVRRRFVEGGPRIFSQDVDTLTMQSTLEGS
FDVGDHKWYWDVNGIYGTNTAHQVFTGNLNAAKLARALGPVADCTGECVPFNIFGGAGSI
TQAMLDYVTFDERDRSEQELWDVTANLSGELFDLPGGAVGFAVGYEHRDQQASYTPDPII
TAGLGADVPTSPARGGFNVDEFYGELRIPILSDTPFFEKLELSGAARHSSYSSFGSNTTY
TVSGLWKPVKDLLLRGGYAESLRAPSIGELYAGRSRTDATIDDPCTSATGGSWADPTVRA
NCIANGVPADGSYDEPTGGQLGIFSRGSTALKPETAKTWTAGFTYAPAWARDSFASAFSV
EVNYYNIRLKNAIDSVPATLTLRRCAFDGDPVSCAAITRTGSGAVAGIDGVLQNLNAINT
DGVDGTLIYRSKMIGNGSAGLSVNAAYLHKYDIVPPSDLNAATIKCAGTERCGSSDQAYP
RFKANATIDYSTDAWGLSFTGRYISKVTEGDGHVMGTTFYGDMQAYFSPDWMDHRARFTI
GVNNLFDKSPPLCNTCDSANFDPTTYDLPGQFGYLRLSYKM
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttaaaagtgccttgcaatgtggcgtcgtgctgtcggtcgtcgcctggaccatt
cctgcctttgcccaatccaccgcgccgcaggccgatgacggcgcgcagatcatcgtcacc
ggatcgcgcatccgccagaatccgctggatcaggacaaaccgatcgtcaccgtcgaccag
caggcgatcgcccgcaccggcctgacctccatcgccgatgtgctgcaacgcattcccagc
gccgccggtggcctgaataccaaggtcaacaatgccggcaatatcggcggcccgcccgac
ggcaccggcgtcagctccggctcggccgaagtcgatcttcgctatctgggcgccaagcgc
acgctgatcctggtcgacggaatgcgctatgtgaacggctcggccgccggcggcatccct
gcctcggtcgacctcaacaccattccgcagggcatgatcgaaaaggtcgaggtgctgcaa
tcgggcgcctctccgctctacgggtcggacgcggtcgccggcgtcgtcaacatcatcacc
aaacagtcgcaaaaggggctggacctttccgcccaggtcggcagctatcggcagggcgac
ggcgaaacctacgacttcaacgccagctacggcttccagtcggatcgcgtgtcggtgatc
gtcggcggcaattatgtgaagcagatgccggtacgcaccgccgatcgctcgatttcgcta
tggccggcggcgggcggcagcagttgcctcgacggcggctgctccagcgccaccccgctc
ggccggtatgacgtgctggaccagagcctgacgctcaaacaggccgtgaccagccgcgcc
ccggtgctgagcgactatcgcaactgggccggcaccaatgtcgacggcttcaacttcgcg
ccctataattatctgctgaccccgtccgaacgctatggcggcttcctgagcgccaaggtc
gatttctccgacacggtcagcctgcgctcgcgccttgtctaccagcatcgcaactcgacc
acgcaggcggccttcctgccactgtttatcggcccggatgcgggtaacggcaatctgctc
gacaccatctcgatcgatgcgaccaatccgttcaacccgttcggcgtgacgctgtcgtcg
ggcgcggacggcaccccggccaattattcgacggtgcgccgccgtttcgtggagggcggg
ccgcgcatcttcagccaggatgtcgatacgctcacgatgcagtcgacgctcgaaggctcc
ttcgatgtcggcgaccataaatggtattgggatgtcaacggcatatacggcaccaacacc
gcgcatcaggtgttcaccggcaacctcaatgccgccaagctggcccgcgcgctcggcccg
gtggccgactgcaccggggaatgcgtgccgttcaacatcttcggcggcgcaggatcgatc
acccaggcgatgctcgactatgtgacctttgacgagcgcgaccgcagcgagcaggaactg
tgggatgtcaccgccaacctgtcgggcgaattgttcgatttgcccggcggcgcggttggc
ttcgcggtcggctatgaacatcgggaccaacaggcctcctacacgcccgatccgatcatc
accgcggggctgggcgcggacgtgcccaccagccccgcgcgcggcggcttcaacgtcgat
gaattctatggcgaactgcgcatcccgatcctgtccgacacgccctttttcgagaagctg
gaactgagcggcgcggcccgccattcaagctattccagcttcggcagcaacaccacctac
accgtgtcgggcctgtggaagccggtgaaggatctgctgctgcgcggcggctatgccgaa
agcctgcgcgcgcccagcatcggcgaactctatgccggccggtcgcgcaccgacgccacg
atcgacgatccctgcaccagcgcgacgggcggttcctgggccgatccgacggtccgcgcc
aactgcatcgccaacggcgtaccagccgacggcagctatgacgaaccgacaggcggccag
ctcggcatcttctcgcgcgggtccaccgccctgaagccggaaaccgccaagacctggacc
gccggcttcacctatgccccggcctgggcgcgcgacagcttcgccagcgcattcagcgtc
gaggtcaactattataatatccgcctgaagaacgcgatcgactcggtcccggcgacactg
acgctgcgccgctgcgccttcgacggcgatccggtgagctgcgccgcgatcacccgcacc
ggcagcggcgcggtggcgggcatcgacggcgtgctgcaaaatctgaacgccatcaacacc
gatggcgtcgacggcacgctgatctatcgctcgaagatgatcggcaatggctcggccggc
ctcagcgtcaacgcggcctatctgcacaaatatgacattgtgccgccgtcggacctgaac
gcggcgacgatcaaatgcgccggcaccgaacgctgcggctccagcgatcaggcctatccg
cgcttcaaggccaacgcgacgatcgactattcgaccgacgcctggggtctgtccttcacc
ggccgctatatcagcaaggttacggagggcgacggccatgtcatgggtacgaccttctat
ggcgacatgcaggcctatttctcgccggactggatggaccatcgggcgcgcttcacaatc
ggcgtgaacaatctgttcgataagtcgccgccgctctgcaacacctgcgacagcgccaat
ttcgacccgaccacctatgatctgcccggccagttcggctatctccgcttgtcctacaag
atgtga
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