Sphingobium sp. CAP-1: GL174_04970
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Entry
GL174_04970 CDS
T10467
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
spca Sphingobium sp. CAP-1
Brite
Enzymes [BR:
spca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GL174_04970 (addB)
DNA repair and recombination proteins [BR:
spca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GL174_04970 (addB)
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Ortholog
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GFIT
Other DBs
NCBI-ProteinID:
QGP78408
UniProt:
A0A6I5YQX3
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All DBs
Position
MIN1:1035492..1038461
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AA seq
989 aa
AA seq
DB search
MANGARPALFTIPAHRAFADALVTGLLAQHRGDPMALAQGMILLPNNRAIRAVSDAFVRQ
SGGGLLLPRLVAIGDPDMGEQVGGALDPLGEEETIPPAIAPMRRQMMLARMVQQAKPEVD
AGQALLLGQALGAVLDQMQVERVPLEALRKLELSEELSKHWQTSLTIFEILIARWPDELA
RTGCIDLADRRNRLFDRLAARWAAHPPAGFVVAAGVSTTAPAVARLLRRIGTMAQGMVVF
AGLDQHMDEEAWDAIGPFDPDPLTGQRKPGHESHPQYALKRLLDGMSATREDVANWRWGS
EHDARAVRGRNISNAMLPPRLTSRWRDLKTADRSLAGVEALEVATPGEEAQAIAIALREA
LETPERTAALVTPDRQLATRVSAHLRRWGIEADDSAGSPLSRLLPGTLLIAMAEVVAERF
APVPLLTLLKHPLVIKGEERLNWLEGVRALDLLLRGPRSQAGLIGIDLLMHPRDDDRQRV
LRAQVRDWWPTARALLEPLETDFASAADLGAQLAVLRERAGALTGDAVWAGHQGHAAADL
FAEMEAAAPEGPRQADPRALPALLDHMLGGVSVRPPQGGHPRISILGLIEARLMQADLMI
LGGLNEGTWPGLPSPDPWLAPRIRRELGLPGLETRIGLAAHDFAGALGAPHVLITRARRG
SGGPAVASRFWLRLKAMAGPQWKSAERYADLARAIDAPAAYHPAKRPAPAPPISVRPKVI
PVTDVDRLKADPFAFYAKRVLRLGRLDPVDADAGPAWRGTAVHEILQHWAEAGTLDPADL
EARARAMFDQPEVHPLLKALWQPRLIEAIRWIAAEVAKDKAEGRSILAVEREGRAEIAGV
TLMGKADRIDRLADGRIGIIDYKTGKPPSARQVKAGYTLQLGLLGVIAELGGFDGLGPRV
QAGDFEYWSLAKKGDQFGYRERPVDPMGKRDKIVTDSFTEHAHEHFEGVANDYLLGPAPF
RAEINPEVANYGDYDQLMRLEEWYGRDDG
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggctaatggcgcgcgtccggcgctgttcaccattccggcgcatcgcgcctttgccgat
gcactggtgacaggattgctggcgcagcatcgcggcgatccgatggcgctggcgcagggg
atgatcctgttgcccaataatcgcgcgatccgggcggtgagcgacgccttcgtccggcaa
tcgggcggcgggctgctgctgccccggctggtggcgatcggcgacccggatatgggcgag
caggtcggcggcgcgctcgatccgctgggcgaggaagagacgatcccgccggcgatcgcg
cccatgcggcggcagatgatgctggcgcgcatggtgcagcaggccaagcccgaagtggat
gcggggcaggcgctgttgctgggacaggcgctgggtgcggtgctggaccagatgcaggtg
gagcgcgtgccgctggaggcgctgcgcaagctggagctttccgaggaactgtcaaaacac
tggcagacttcgctgacaatattcgagatattgattgcccgctggcccgatgagctggcc
cggacgggctgcatcgatctggccgatcgccgcaaccggctgttcgatcggctggccgcg
cggtgggcggcgcatccgccggcgggcttcgtcgtggcggcgggcgtttcgaccaccgcg
cccgccgtcgcccggctgttgcggcggatcggcacgatggcgcagggcatggtggtgttc
gccggcctcgaccagcatatggacgaggaagcgtgggacgcgatcgggccgttcgatccc
gatccgctgaccggccagcgcaagcccggccatgaaagccatccccaatatgcgctcaag
cgcctgctcgacggtatgagcgccacgcgcgaggatgtcgccaactggcgctggggcagc
gagcatgatgcgcgggcggtgcgcgggcgcaatatctccaacgcgatgctgccgccccgg
ctgacgagccgctggcgtgacctcaagacggcggatcgttcgctcgccggggtcgaggcg
ctggaggtggcgacgccgggcgaagaggcgcaggcgatcgctatcgcgctgcgcgaggcg
ctggagacgcctgaacgcaccgccgcgctggtgacgcccgaccggcaactggcgacgcgg
gtgtcggcgcatctgcggcgctgggggatagaggcggacgacagcgccgggtcgccgctg
tcgcgcctgctgcccggcacgctgctgatcgccatggcggaagtggtggcggagcggttc
gcgccggtgccgctgctgactctgctcaaacatccgctggtgatcaagggcgaggagcgg
ctgaactggctggagggggtgcgcgcgcttgacctgttgctgcgcggaccgcggtcgcag
gcggggctgatcggcatcgacctgctgatgcatccgcgcgacgatgaccggcagcgcgtg
ctgcgcgcgcaggtgcgcgactggtggccgaccgcgcgggcattgctggagccgctggag
acggacttcgccagcgccgccgatctgggcgcgcaactggcggtcttgcgggagcgggcc
ggggcgctgaccggcgatgcggtctgggctgggcatcagggtcatgccgccgccgacctg
ttcgccgaaatggaggccgccgcgcccgaaggcccgcgtcaggccgatccgcgcgcgctg
ccggctttgctcgaccatatgctgggcggcgtgtcggtgcggccgccgcagggcgggcat
ccgcgcatctctattttgggcctgatcgaggcgcggctgatgcaggccgacctgatgata
ttgggcggcctcaacgaaggcacatggccaggtctgccgtcgcccgatccctggctggcg
ccgcgcatcaggcgcgaactaggcctgccggggctggagacgcgcatcggcctggccgcg
catgatttcgcgggtgcgctgggcgcgccgcacgtcctcatcacccgcgcgcggcggggg
agcggcggaccggcagtggcgtcgcgcttctggctgcgactgaaggcgatggccgggccg
caatggaaatcggcggaacgctatgccgatctggcacgcgcgatcgacgcgccggcggcc
tatcatcccgccaaacgtcccgcgcccgccccccccatatcggtgcggccaaaggtcatt
cccgtcaccgatgtcgaccggctgaaggccgatcccttcgctttctacgccaagcgggtg
ctgcgccttggccggctcgatccggtcgacgccgatgccgggccggcctggcgcgggacg
gcggtgcatgaaattttgcagcattgggcggaagccggaacgctggaccccgccgatctg
gaagcgcgcgcccgcgccatgttcgaccagcccgaagttcaccccttgctcaaggcgctg
tggcagccccgcctgatcgaggcgatccgatggatcgcggccgaagtggcgaaggacaag
gcggaagggcggagcatattggcggtcgagcgggagggccgggcggagattgccggtgtc
acgctgatgggcaaggccgaccggatcgaccggctggccgacgggcggatcggcatcatc
gattacaagaccggcaagccgcccagcgcgcggcaggtgaaggcgggctatacgctccag
cttggcctgctgggggtcatcgccgaactgggcgggttcgacgggcttggcccccgcgtg
caggcgggcgatttcgaatattggtcactcgccaagaagggcgaccagttcggctatcgc
gaacggccggtcgacccgatgggcaagcgcgacaagatcgtcaccgacagtttcaccgaa
catgcgcatgagcatttcgaaggggtggcgaacgactatctgctgggaccggcgccgttc
cgggcggaaatcaaccccgaagtggccaattatggcgattatgaccagctcatgcggctg
gaggaatggtatggccgcgacgatggctaa
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