Sphingobium sp. CAP-1: GL174_05375
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Entry
GL174_05375 CDS
T10467
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
spca Sphingobium sp. CAP-1
Brite
KEGG Orthology (KO) [BR:
spca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spca03009
]
GL174_05375
Enzymes [BR:
spca01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
GL174_05375
Ribosome biogenesis [BR:
spca03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GL174_05375
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
PSD5
MTS
Motif
Other DBs
NCBI-ProteinID:
QGP78478
UniProt:
A0A6I5YR35
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All DBs
Position
MIN1:complement(1120383..1121588)
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AA seq
401 aa
AA seq
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MTDSDVNSIIRIAAKGDGVTADGRHFPLTAPGDRIEPDGRVIFGVHHVDPPCEHFPACGG
CQLQHLDEDSYADFVTARVTGALAGQGVTPGAVLPPHISPPMTRRRASLRAARAGKKITI
GFAEEGSHRLIDLRMCAVLDPRLFALIAPLRDLLELILPDKRAAHVRMSLIDQGVDLLLE
GVKVAGLAADEGLGDFARAHGLARLTIDEGDGPQTRWEPEAATVSFGGVAVAFPPFSFLQ
ATPDGEAALVGAVRDALPATGAIADLFCGLGTFALALGDKRPVYAAEGARDVILSLKLGA
GRAQRRLAADHRDLFRRPLTAEELNRFAAIVLDPPRAGAREQVLQLAGSSVPLIAYVSCN
PASFARDAAHLVAAGYVLESVKPVGQFRWTTHVELVGIFRK
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
gtgacagacagcgacgtaaacagcatcatccgcatcgccgccaagggcgatggcgtcacg
gccgatggccgccacttcccgctgaccgcgccgggcgaccggatcgaaccggatggacgc
gtcattttcggcgtgcatcatgtcgatccgccctgcgagcatttcccggcctgtggcggg
tgccaactccagcatctggacgaggacagctatgccgatttcgtgacggcgcgcgtcacc
ggcgcgctggcgggacagggggtgacgccgggcgcggtgctgccgccccatatctcgccg
ccgatgacgcggcggcgcgcgtcgctgcgcgcggcgcgggcgggcaagaagatcaccatc
ggtttcgcggaggagggcagccacaggctgatcgacctgcgcatgtgcgcggtcctcgat
ccccggctgttcgcgctgatcgcgccgctgcgtgatttgctggaactgatcctgccggac
aaaagggcggcgcacgtgcgcatgtcgctgatcgatcagggtgtcgacctgttgctggag
ggggtgaaggtcgccggccttgcggcggacgaagggctgggcgatttcgcgcgggcgcac
gggctggcgcggctgacgatcgatgaaggcgacgggccgcagacccgctgggagccggag
gcggcgacggtcagttttggcggcgtggcggttgcttttccgcccttctcctttttgcag
gcgacgcccgatggtgaggcggcgctggtcggcgcggtgcgcgatgcgctgcctgcaacg
ggcgcgatcgccgatctgttctgtgggcttggcactttcgcactggctttgggcgacaaa
cggccggtctatgcggcggagggcgcgcgcgacgtgatcctgtcgctgaagctgggcgcg
ggacgggcgcagcggcggctggcggcggatcatcgcgacctgtttcgccggccgctgacg
gcggaggaattgaaccgcttcgccgccatcgtactggacccgccccgcgccggcgcgcgc
gaacaggtgctgcaactggcgggatcaagcgtgccgctgatcgcctatgtctcctgcaat
cccgccagtttcgcgcgcgatgcggcgcatctggtcgcggcgggctatgtgctggagagc
gtcaagccagtggggcagttccgctggaccacccatgtcgaactggtgggcatctttcgg
aagtaa
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