Sphingobium sp. CAP-1: GL174_05665
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Entry
GL174_05665 CDS
T10467
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
spca Sphingobium sp. CAP-1
Pathway
spca00550
Peptidoglycan biosynthesis
spca01100
Metabolic pathways
spca01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
spca00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GL174_05665 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GL174_05665 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spca01011
]
GL174_05665 (mrdA)
Enzymes [BR:
spca01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GL174_05665 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
spca01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
GL174_05665 (mrdA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
bMG1
EABR
Motif
Other DBs
NCBI-ProteinID:
QGP78529
UniProt:
A0A6I5YL41
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All DBs
Position
MIN1:1185709..1187787
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AA seq
692 aa
AA seq
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MKFPFPKRKIVTEATQSFTFSRRAMVVGGLQGAVGAVLVGRMAWISVVQNEKYSLLSESN
RVNLTLIPPRRGWIIDRNGRPLANNRTDFRVDLIPQRVIDPEATITHLARLLKLEPDEVD
RIREDLDKSAGFRPVQVADKLTYDQYAAISVRLPDLPGVAPSQGFSRNYPAGATVGHLLG
YVGAATAEEYKARKDPLLITPGFKVGKDGLEKAFDRHLTGKPGAKRVEVTARGKIMKELT
TRQDTPGRSIKLTIDAGLQEFAGRRLATQSGSVVVLDCHNGDVLALASMPSFDPNSFSDG
ISHLEYEMLSKDDHVPLRNKTLQGLYPPGSTVKPMVALALLEAGIGPQETVNCPGAIRVG
NTLFHCHKKRGHGSLNMRGAIAQSCDIYFYQMAQRIGMDRIASMAHRVGMGQKFDLPFPS
QSYGTVPDPAWKERKYNQKWQVYDTVNATIGQGYMLINPLQMAVMAARLATGKQLMPNFI
FGAPRAEPAPVGSTEEHLVVIRDAMNAVVNGGGTGGAARSSIPGVMIAGKTGTAQVRRIT
MAERAGGVRGNAGLPFKLRDHALFQGFAPFDNPRYAIACIIEHGGHTIRNEDAPMIASDT
LSYLFDPAKAMEKLETLEKGWGGTPAERQARQMAAFRLAKAIEKGEAPPPADNAAENATA
ANAAEAPSPPPPPPPPADEDDVPPPANSASAP
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttcccttccccaagcgcaagatcgtcaccgaagccacccaatccttcaccttt
tcgcgccgtgcgatggtggtgggcgggttgcagggtgcggtcggcgcagtgctggtgggg
cgcatggcctggatcagcgtcgtccagaatgaaaaatacagcctgttatcggaaagcaat
cgcgtcaacctgacgctgatcccgccgcgccggggctggatcatcgaccgcaacggccgg
ccgctggccaataaccgcaccgatttccgcgtcgacctgatcccccagcgggtgatcgat
cccgaagcgacaatcacccatcttgcccggttgctgaagctggagccggacgaggtcgat
cgcatccgcgaggatctggacaagtccgccggcttccgccccgtccaggtcgccgacaaa
ctgacctacgaccaatatgccgccatcagcgtgcgcctgcccgacctgcccggcgtcgcc
cccagccagggcttttcgcgcaactatcctgccggggccacggtcggccatctgctgggc
tatgtcggcgcggcgacggcggaagagtataaggcgcgtaaagatccgctgctcatcacg
ccgggcttcaaggtcggcaaggatgggctggaaaaggcgttcgatcgccacctgaccggc
aaacccggcgccaagcgggtggaagtgacggcgcgcggcaagatcatgaaggaactcacg
acccggcaggatacgccgggccggtcgatcaagctgaccatcgacgcgggattgcaggaa
tttgccggccgccgcctggcgacgcagagcgggtcggtggtggtgctggactgccataat
ggcgacgtgctggcgctcgcctccatgcccagcttcgatcccaacagcttttccgacggc
atcagccatctggaatatgagatgctgtcgaaggacgatcatgtcccgctgcgcaacaag
acattgcagggtctgtatccgcccggatcgacggtaaagccgatggtggcgctggcgctg
ctggaggccgggatcggcccgcaggaaacggtcaattgccccggcgccatccgcgtcggc
aacacgctgttccactgccacaagaagcgcggtcacggatcgctcaacatgcgcggcgcg
atcgcccagagttgcgacatctatttctaccagatggcgcagcgcatcggcatggatcgc
atcgccagcatggcccaccgcgtcggcatgggccagaaattcgacctgcccttccccagc
cagagttatggcaccgtgcccgacccggcgtggaaggaacggaaatataaccagaaatgg
caggtttacgacaccgtcaacgccaccatcggtcagggctatatgctcatcaatccgctg
caaatggcggtgatggcggcgcgtctggcgaccggcaagcaactgatgcccaatttcatc
ttcggtgcgccgcgtgctgagccggcgccggtcggatcgaccgaggagcatctggtcgtc
attcgcgacgcgatgaatgcggtggtcaatggcggcggcaccggcggcgcggcgcgcagt
tcgatccccggcgtcatgatcgcaggcaagaccggcaccgcgcaggtccgccgcatcacc
atggcagagcgagcgggcggcgtgcgcggcaatgccggcctgcccttcaaactacgcgac
catgcgctgtttcagggcttcgctccgttcgacaatccacgctacgccatcgcctgcatc
atcgaacatggcggccacaccatccgcaatgaggacgcgccgatgatcgccagcgatacg
ctgtcctatctgttcgatccggccaaggcgatggagaagctggagacgctggagaagggc
tggggcggcactcccgccgaacggcaggcgcggcagatggcggcattccgcctggccaag
gcgatcgagaagggcgaagcgccgccgccggccgacaatgccgccgaaaatgcgacggcg
gcgaacgcagccgaagcgccatcaccgcctcccccccctccgccgccggccgatgaagat
gacgttccgccgcccgccaacagcgcgagcgcgccatga
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