Sphingobium sp. CAP-1: GL174_06195
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Entry
GL174_06195 CDS
T10467
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K02005
HlyD family secretion protein
Organism
spca Sphingobium sp. CAP-1
Brite
KEGG Orthology (KO) [BR:
spca00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
GL174_06195
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_YknX
Beta-barrel_RND_2
BSH_RND
Beta-barrel_AprE
BSH_CzcB
BSH_CusB
BSH_YknX
Beta-barrel_RND
YknX_C
RND-MFP_C
HH_CzcB
Biotin_lipoyl
HH_MFP_RND
HH_YBHG
HH_EMRA
HH_AprE
Gp77
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
QGP78619
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Position
MIN1:1301652..1303172
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AA seq
506 aa
AA seq
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MSNDVSKDQDLDDFLGAKPQKPWRKWAIRGGMAAILLIVILLIGWRFSGEDKPNYATREV
RQGDLTVTVSATGNLKPINQVDVGSEQSGKITAVYVDVNDRVTRGQKLAELDTRRLVDTV
TQNQAQVASSQASVTQAQAQVALAKATLDRQETVFRLSGGRVPAKTELDAARADYQGAIA
NLRAAQAQVNVSRAQLSTAQTNLSIAQIVSPVNGVVLSRDIEPGQTVAASLNAPVLFTLA
EDLTQMEVEVSVDEADVGQVKEGQTASFAVDAFPGRTFPAKVTRVNVGSNASSSSSSSTT
STTSSTGTVVAYTAVLSVDNRDETLRPGMTATADIVTQELHDVLLVPNSALRFKPSTQAQ
GGGITSVLPGPGRMRRGGAQRQVNFGAGSSQTVYIVGEDGNPRAVQVIVGASDGSRTVVT
GGDLKAGMRVITGQLAAGQQAPAEDQKDDQKAGQADSKASDRRNNPSADGSPASVRTLGN
SGDGAPDTAPVAPATGSRGTGRQSGS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgatgtgagcaaggatcaggatctggacgattttctgggcgccaagccgcag
aaaccatggcgcaaatgggcaatccggggcggcatggcagccatcctgctgatcgtcatc
ctgttgatcggctggcgtttttcgggcgaggacaagcccaattatgcgacccgcgaagtg
cggcagggcgacctgaccgtcaccgtgtccgccaccggcaacctcaagccgatcaatcag
gtcgatgtcgggtccgaacagtcgggcaagatcaccgccgtctatgtcgacgtgaatgat
cgcgtgaccagggggcagaagctggccgaactcgatactcgccggctggtcgataccgtg
acccagaatcaggcacaggtcgcatcgtcgcaggccagtgtcacgcaggcgcaggcgcag
gtcgcgctggcgaaggcgacgctcgaccggcaggagactgtgttccggctgtcgggcggc
cgggtgccggcaaaaaccgaactggatgccgcccgcgccgactatcagggcgcgatcgcc
aatttgcgggcggcgcaggcacaggtaaatgtgtcgcgcgcgcaattgtccactgcccag
accaacctgtcgatcgcccagatcgtgtcaccggtgaacggcgtcgtgctgtcgcgcgac
atcgagccgggccagaccgtcgccgcttcgctgaacgcgccggtgctgttcaccctggcc
gaggatctgacccagatggaggtcgaagtgtcggtggacgaggccgatgtcggacaggtg
aaggaaggccagaccgccagtttcgcggtcgatgccttccccggccgcaccttcccggca
aaggtcacgcgggtcaatgtcgggtcgaacgcgagcagttcgtcctcctcatcgaccacc
agcacgaccagcagcaccggcacggtggtcgcctataccgccgtgctgtcggtcgacaat
cgcgacgaaacgctgcgccccggcatgaccgcgacggccgacatcgtgacgcaggaactg
catgacgtgctgctcgtccccaacagcgcgctgcgcttcaagcccagcacacaggcgcag
ggcggcggcatcaccagcgtcctgcccggccccggccggatgcggcgcggcggcgcgcag
cggcaggtcaatttcggcgcgggcagcagccagaccgtctatatcgtcggcgaggacggc
aatcccagggcggtgcaggtgatcgtcggcgccagcgacggatcgcgcacggtcgtcacc
ggcggcgatctcaaggccgggatgcgggttatcaccggccagcttgccgccggccagcaa
gccccggccgaggaccagaaggacgatcaaaaggcgggacaggccgacagcaaggccagc
gatcgccgcaacaatccgtcggcggatggcagtccggccagcgtccgcacgctgggcaat
tcgggcgacggcgcgcccgacactgcgccggtcgcgcccgccaccggatcgcgcggcacc
ggccggcagagcggaagctga
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