Sphingobium sp. CAP-1: GL174_06295
Help
Entry
GL174_06295 CDS
T10467
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spca Sphingobium sp. CAP-1
Brite
KEGG Orthology (KO) [BR:
spca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spca02000
]
GL174_06295
Transporters [BR:
spca02000
]
Other transporters
Pores ion channels [TC:
1
]
GL174_06295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
OMP_b-brl_3
Plug
Motif
Other DBs
NCBI-ProteinID:
QGP78638
LinkDB
All DBs
Position
MIN1:complement(1319552..1321960)
Genome browser
AA seq
802 aa
AA seq
DB search
MSVRSSVRRSSRAALLLACAFGALNSASAQEPSAEDDTITVTGRRISESSEAIGADKVTN
TVGITRDALLSAPSGISGLKMLEQLPGFNVQTDGPLGLYEFGNSVQTRAFNLDQIGFLVD
GIPTGRSDAFGGSPVFRYVDNENLGRVEASVGAGDVGLPSYSSLGPIISYNSIAPQDDMG
LFVSQSFGDNNLKRTFIRASTGKVGPFKAYVSRTKLDSDLWRGAGSVDREHWEAQVHADL
GGTSWGRFKFVSNDFFDYDSPTLSRTQYASATPSFNGLGGTGRDIGYIVAPPNTTAGFTP
TVPGIAYSNSAYANSYNLAINVRKDKLYGATVHLGIADNVWFESTAYWEDKGGYGVSPDT
YANSLFYYTGQNAIGLPVNAPKGTQFGRSGVGGDRYGLTTKLHWELGSHAVEAGAWVEQD
KYHRTQARYNTTDGSPSSPADLDSLVFLRRDYRSKRDTTQLFLKDTIKLADDRLIVDLGF
KSLFLDYHYFGYRDFADYFRNIGTAAAPNYVAGWGQHGATASYNDGFLPMAGLIYKLDGH
TQLFASFAENTALPKGLDDIFSVVPTNGALAPTPKPEKSRNFELGVRTNQSEFYGALAFY
FTKFDDRIAQTAIAVAGTTELQSVYTNVGRVRSYGAEFTGTYKPAFLNGLAYFNLNATYN
NAKFQDDLPNGTALAGKYLPDSAKWIVNGGVTVEPASWLVANFSGKYTSSRFASLTNLRP
DPANAAGPQISSAIPGFTIFSAYVDIGDGITLGPVKSVKARFNVDNLFDKDTLSFISPQT
AVDGFFRPQSPRTFQFTISGEI
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtccgttcgtccgtccgccgttcgtcgcgcgcggccctcttgctggcctgcgca
ttcggcgcgctgaattccgcctcggcgcaggagccgtcggcggaggatgacaccatcacc
gtcaccggccgccgcatctccgaatcctccgaagcgatcggcgcggacaaggtgacgaac
accgtcggcattacccgcgacgcgctgctctccgccccgtcaggcatttccgggctaaag
atgctggagcaattgcccggcttcaacgtccagacggacgggccgctcggcctctatgaa
ttcggtaacagcgtccagacccgcgccttcaacctcgaccagatcggcttcctggtcgat
ggtatccccaccggccgcagcgacgccttcggcggcagcccggtgttccgctatgtcgac
aatgaaaatctgggccgggtcgaagcatcggtcggcgccggcgacgtgggtctgcccagt
tactcttcgctcggccccatcatctcctacaacagcatcgcgccgcaggacgatatgggc
ctgttcgtgtcgcagagcttcggcgacaacaacctgaagcgcaccttcatccgcgccagc
accggcaaggtcgggccgttcaaagcctatgtcagtcgcaccaagctggacagcgacctg
tggcgcggcgccggttcagtggaccgcgaacattgggaggcgcaggtccatgccgatctg
ggcgggaccagctgggggcgcttcaaattcgtgtcgaacgactttttcgactatgattcg
cccacgctcagccgcacccaatatgcgtcggccacgccgtctttcaacggcctgggcggc
actggccgcgacatcggctatatcgtcgcaccgcccaacacgacggcgggtttcacgccg
accgtgccgggcatcgcctattccaactccgcctatgccaacagctacaacctcgccatc
aacgtgcggaaggacaagctgtacggcgcgaccgtgcatctgggcatcgccgacaatgtg
tggttcgaaagcacggcctattgggaggacaagggcggctatggcgtctcgcccgacacc
tatgccaacagcctcttctattatactggccaaaatgcgataggcctgccggtgaatgcg
cccaagggcacgcagtttggccgttcgggcgtgggcggcgaccgctatggcctgacgacc
aagctgcactgggaactgggcagtcacgcggtcgaagcgggcgcatgggtggaacaggac
aaatatcaccgtacgcaggcccgctacaacacgaccgacggctcgccctctagccccgcc
gacctcgacagcctcgtattcctgcgtcgcgattataggtccaagcgggacacgactcag
cttttcctcaaggacacgatcaagctggccgacgaccggctgatcgtcgatctgggcttc
aagtcgctgttcctcgattatcattatttcggctatcgtgactttgccgactatttccgc
aatatcggcaccgccgccgcgcccaactatgtcgcgggctggggacagcatggcgcgacc
gccagctataatgacggtttcctgccgatggcgggcctgatctacaagctggacggacac
acgcagctcttcgcctcctttgcggaaaataccgcgttgcccaaggggctggacgacatc
ttctccgtcgtcccaacgaacggcgcgctggcaccgacgccaaagcctgaaaagtcccgc
aatttcgaactgggcgtccggaccaaccagtcggaattctatggcgcgctcgcattctat
ttcaccaaatttgatgatcggatcgcccagacggcgatcgccgtcgccggcacgacggaa
ctgcaaagcgtttacaccaatgtcggtcgggtccgttcctacggcgcggaatttactggc
acctacaagccggccttcctgaacggcctcgcctatttcaaccttaacgccacctacaac
aatgcgaagttccaggacgatctgcccaacggcacggcgctggccggcaaatatctaccc
gacagcgcgaaatggatcgtcaatggcggcgtcaccgtcgaaccggctagctggctggtc
gcgaacttcagcggcaaatataccagcagccgcttcgccagcctgaccaatttgcggccc
gatccggccaacgccgccggcccgcaaatctcctcggccattcccggcttcaccatcttc
agcgcctatgtcgacattggcgacggcatcactctgggtccggtcaagagcgtgaaggcg
cggttcaacgtcgacaatctgttcgacaaggacacattgtcgttcatctcgccgcagacg
gcggtggacggcttcttccgcccgcaatcgccacgcaccttccagttcaccatatcgggt
gagatctga
DBGET
integrated database retrieval system
