Sphingobium sp. CAP-1: GL174_08080
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Entry
GL174_08080 CDS
T10467
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
spca Sphingobium sp. CAP-1
Brite
KEGG Orthology (KO) [BR:
spca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spca03009
]
GL174_08080
Enzymes [BR:
spca01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
GL174_08080
Ribosome biogenesis [BR:
spca03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
GL174_08080
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
FtsJ
Methyltransf_31
Ubie_methyltran
Methyltr_RsmF_N
Methyltransf_25
RsmF-B_ferredox
MTS
Motif
Other DBs
NCBI-ProteinID:
QGP78954
UniProt:
A0A6I5YMP9
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All DBs
Position
MIN1:complement(1682569..1683747)
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AA seq
392 aa
AA seq
DB search
MTPQARIQAAIELLDAIIASARDGGPAADTLIARYFKDRRYAGSRDRRAVRDHVYRAIRR
AAERPDTGRAAMVGLARDLPEIAALFDGGPHAPEPIAPGEPGAAPGAVPAWLVSLLAAPV
EQDALLGRASVDLRVNALKATPADLAALLPDADPIAGLPAARRLSEGFPIEQNPAWKQGL
VEVQDAGSQLIVQGCAAQPGMTVVDLCAGAGGKTLALAAAMAGKGILVATDTIRSRLARL
GPRAERAGATFIETLLLDQSHEARGLESLNGQADVVLVDAPCSGTGTWRRNPESRWRLTA
ERLDRLVAEQARILDFAAPLLAPGGALVYATCALTDREGRDQVDAFLTRNAGWAVEPLDL
PLGRAHGAGWLLTPGHDGTDGFFFARLRRAAS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgacaccacaggctcgcatccaggcggcgatcgaattgcttgacgccatcatcgcgtcg
gcgcgcgacggcggtcccgccgccgacacgctgatcgcccgctatttcaaggaccgccgc
tacgccggatcgcgtgaccggcgggccgtgcgtgaccatgtctatcgcgccatccgccgc
gcggccgaacggcccgacacggggcgggcggcgatggtcggcctggcccgcgacctgccg
gaaattgccgccctgttcgatggcggcccccatgcgcccgaaccgatcgcaccgggcgag
ccgggcgctgcgccgggcgctgtgccggcatggctggtctcgttgctggccgcgccggtc
gagcaggacgccctgctgggccgggcgtcggtggatctgcgcgtcaatgcgctgaaggcg
acgcccgccgatctggcggccttgctgcccgacgccgatccgattgcgggcttgcccgcc
gcgcgccgcctgtcggaaggcttcccgatcgagcagaatccggcctggaaacaggggctg
gtcgaggtgcaggatgccggcagtcagttgatcgtccagggctgcgcagcgcagccgggc
atgaccgtggtggacctatgcgccggggcgggtggcaagacgctggcgctcgccgccgcg
atggcgggcaagggcatattggtcgccaccgacacgatccggtcgcgactggcaaggctg
gggccgcgggccgagcgggcgggcgcgaccttcatcgaaacgctgttgctggaccagagc
catgaggcgcgcgggctggaaagcctgaacgggcaggccgatgtcgtgctggtcgatgcg
ccctgttcgggcactggcacctggcggcgtaacccggaatcgcgctggcggctgacggcg
gagcggctcgaccggctggtcgccgaacaggcccgcattctcgatttcgccgcgcccctg
ctggcgcccggcggcgctctggtctatgccacctgtgcattgaccgaccgggagggccgc
gatcaggtggacgcttttctgacccgcaacgccggatgggcggtggaaccgctcgacctg
ccgctgggccgcgcgcatggcgcgggctggctgctgacgccgggccatgacgggaccgac
ggcttcttcttcgcgcggctgcgccgggccgcgtcctga
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