KEGG   Sphingobium sp. CAP-1: GL174_08760
Entry
GL174_08760       CDS       T10467                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
spca  Sphingobium sp. CAP-1
Pathway
spca03030  DNA replication
spca03410  Base excision repair
spca03420  Nucleotide excision repair
spca03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:spca00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GL174_08760 (polA)
   03410 Base excision repair
    GL174_08760 (polA)
   03420 Nucleotide excision repair
    GL174_08760 (polA)
   03440 Homologous recombination
    GL174_08760 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spca03032]
    GL174_08760 (polA)
   03400 DNA repair and recombination proteins [BR:spca03400]
    GL174_08760 (polA)
Enzymes [BR:spca01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GL174_08760 (polA)
DNA replication proteins [BR:spca03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     GL174_08760 (polA)
DNA repair and recombination proteins [BR:spca03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     GL174_08760 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GL174_08760 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DprA_N HHH_5 HAMP_N3 Ribosomal_60s HHH Beta-prop_NOL10_N
Other DBs
NCBI-ProteinID: QGP79077
LinkDB
Position
MIN1:1819431..1822214
AA seq 927 aa
MTQNHLYLVDGSGYIFRAYHQLPPLTNQHGQPVGAVYGYTTMLWKLAEELGKAEGPTHLA
VVLDKGSHTFRNDMYDQYKANRPPAPEDLVPQFPMIRDATRAFSLPCIEEAGFEADDIIA
SYTRAAVAAGWHVTIVSSDKDLMQLIQPGVDMYDTMKNERRGADYVVGKFGVQPEQLGDV
LALMGDSVDNVPGVPGIGPKTASKLITEYGDLESVLAAAPGMKKSKMQENLIAHMDMARL
SRRLVALHDAMDLPEPLDDLTLKGIPKEPLQEFLSHHGFKTLLNRLGAPAAAVAVAATAA
AGADAAPAVPAPAEEPAIDRSLYETVVTQEALDRWIAAAQAEGLVAVDTETDMLDAVSCA
LVGISLATGPNKACYIPVGHGGTDMFAERPAQLDKALVLAKLKPLLEDDSILKIGQNLKY
DLTVLRRHGIEIAPFDDTIVMSFDLDAGQSLAGHGMDEAARTHLGHSCISFKEVVGTGKS
QISFAEVPLPRATEYAAEDADVTLRLWKRFKTRVANEGANRVYELVDRPLVGVIAQMEHQ
GIKVDREHLSRLSAEFTAGIAALETEIHEIAGQPFAIGSTQQLGAILFDKMGYKGGKKGK
SGAYSTDVTILEQLKAQGAPIADKVLEWRQLSKLKSTYTDALQAQINKDTGRVHTSYSLT
GAQTGRLSSTDPNLQNIPIRTEVGRQIRHAFVAEPGHVILAADYSQIELRLAAHMADVPA
LKEAFANGEDIHAATAMQLFGEVNRDTRGRAKTINFAILYGISRWGLAGRLEIGADEAQD
MISRYYERFPGISIYINETIEKARERGYTETLFGRKTWFPRIRASVQHERQGAERAAINA
PIQGTSADIIKRAMARMGPALDAAGLPNVKMLLQVHDELVFELPQGDVDAASAVIRQVME
SAAEPIVKLSVPLGVEIGTGPSWGAAH
NT seq 2784 nt   +upstreamnt  +downstreamnt
atgacccagaatcacctctatctcgtcgacggcagcggctatattttccgcgcctatcat
cagcttccgccgctcaccaaccagcatggccagccggtcggggcggtctatggctatacg
acgatgctatggaagctggccgaggaactgggcaaagccgaaggcccgacccatctggcc
gtggtgctggacaaggggtcgcacaccttccgcaacgacatgtacgaccagtataaggcg
aaccgcccgcccgcgccggaggatctggtcccgcaatttccgatgatccgcgacgccacc
cgcgccttctccctgccctgcatcgaggaagcggggttcgaagccgacgacatcatcgcc
agctacaccagggcggcggtcgcggcgggatggcatgtcactatcgtcagcagcgacaag
gatctgatgcaattgatccagcccggcgtcgatatgtatgacacgatgaagaatgagcgg
cgcggggcggactatgtcgtcggcaagttcggcgtgcagccggagcaactgggcgacgtt
ctggcgctgatgggcgacagcgtggacaatgtgccgggcgtgccgggcatcggccccaag
accgcgtcgaagctcatcaccgaatatggcgatctggaatccgtgctggccgccgcgccg
gggatgaagaagtcgaagatgcaggaaaatctgatcgcccatatggacatggcgcggctg
tcacggcggctggtggcgctgcacgatgcgatggacctgcccgaaccgctggacgatctg
accctgaagggcatccccaaagagccattgcaggaattcctgtcgcatcatggcttcaag
acgctgctcaatcgcctcggcgcgccggcggcggccgttgcggtggcggcgacggctgcg
gccggcgcagacgccgcgcctgcggtccctgccccggcggaggagccggcgatcgaccgc
agcctctatgagacggtcgtgacgcaggaggcgctcgaccgctggatcgccgccgcgcag
gccgaagggctggtcgcggtcgacaccgaaaccgacatgctggacgccgtttcctgtgcg
ctggtcggcatcagcctcgccaccggcccgaacaaggcctgttacatcccggtaggccat
ggcggcaccgacatgttcgccgagcggccggcgcagctcgacaaggcgttggtgctggcg
aagctgaagccattgctggaggatgacagcatcctcaagatcggtcagaatctgaaatat
gacctgaccgtgctgcgccggcacgggattgaaatcgcgccctttgacgacacgatcgtc
atgagtttcgatctggatgcgggccagtcgctcgcgggccatggcatggacgaggcggcc
aggacgcaccttggtcatagctgcatcagcttcaaggaggtggtcggcaccggcaagagc
cagatcagcttcgccgaagtccctctgccccgcgccaccgaatatgccgccgaggatgcc
gacgtgacgctgcgcctgtggaagcggttcaagacccgcgtggcgaatgagggcgcgaac
cgcgtctatgaactggtcgaccgcccactggtgggcgtgattgcccagatggagcatcag
gggatcaaggtcgaccgcgagcatctgtcgcgcctgtcggcggaattcaccgccggcatc
gccgcgctggagacagagattcacgaaattgcggggcagcccttcgcaatcgggtcgacc
cagcaactgggcgcgatattgttcgacaagatgggttataagggcggcaagaaaggcaag
tcgggcgcctattccaccgatgtcaccatcctggagcagttgaaggcgcagggcgcgccg
atcgcggacaaggtgctggaatggcggcaattgtcgaagctcaaatccacttataccgac
gcgcttcaggcgcagatcaacaaggatactggccgcgtccataccagctattcgctgacc
ggggcgcagaccggccgcctgtcctccaccgatcccaaccttcagaatatcccgatccgc
accgaagtcggccggcaaatccgccacgccttcgttgccgaaccgggccatgtcatcctg
gcggcggactatagccagatcgaattgcggctggcggcgcacatggccgatgtgccggcg
ctgaaagaggcgttcgcgaatggcgaggatattcacgccgctacagcgatgcaattgttc
ggcgaggtcaatcgcgacacgcgcggccgggccaagacgatcaacttcgccatcctctac
ggcatttcgcgctggggtctggcgggccggctggagatcggcgcggacgaggcgcaggac
atgatcagccgctattatgagcgcttccccggcatcagcatctatatcaacgagacgatc
gagaaggcgcgcgaacggggttacacggaaacgctgttcggccggaaaacctggttcccg
cgcatcagggcgtccgtccagcatgaacggcagggcgcagagcgcgccgcgatcaacgcc
ccgattcagggcaccagcgcggacatcatcaagcgggcgatggcgcgcatgggtccggca
ctggacgcggcggggttgccgaacgtgaagatgctgctgcaagtgcatgacgaactggtg
ttcgaactgccgcaaggcgatgtcgacgcggcgagcgcggtgatccggcaggtgatggaa
agcgccgccgaaccgatcgtgaagctgagcgtgccgctgggcgtggagatcgggacaggg
ccgagctggggcgcggcgcattga

DBGET integrated database retrieval system