Sphingobium sp. CAP-1: GL174_09250
Help
Entry
GL174_09250 CDS
T10467
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
spca Sphingobium sp. CAP-1
Pathway
spca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GL174_09250 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spca03019
]
GL174_09250 (recQ)
03400 DNA repair and recombination proteins [BR:
spca03400
]
GL174_09250 (recQ)
Enzymes [BR:
spca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GL174_09250 (recQ)
Messenger RNA biogenesis [BR:
spca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GL174_09250 (recQ)
DNA repair and recombination proteins [BR:
spca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GL174_09250 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
QGP79160
UniProt:
A0A6I5YRZ9
LinkDB
All DBs
Position
MIN1:complement(1924657..1926429)
Genome browser
AA seq
590 aa
AA seq
DB search
MRPDIPTLLHDIFGFTSFRGVQQQVVGRVMAGLPTLAIMPTGAGKSLCYQLPSAALDGCC
VVVSPLIALMHDQLRAANAVGLRAASLTSVDADWRETQDRLRNGDLDLLYVAPERASQEN
FRNLLRATKVALFAIDEAHCVSEWGHDFRPDYRLLRPLLDEFPDVPRLALTATADAHTRT
DILVQLGIPQDGLIISGFDRPNIRYAVHPRDGLTRQLADLVAANPGPGVVYAQTRAATEK
LAETLGRSGRAVRAYHAGMDPAQRAANQAAFIASEDMVMVATVAFGMGIDKPDVRFVAHA
GLPKSIEGYYQESGRAGRDGEPAVAHLFWGAEDFARARMRIMELEQGRQQGERARIAALG
ALVETATCRRAILLRHFGESPPPTCGNCDNCLTPPASVDATETARKYLSAVYRTGQSFGS
GHIEAVLTGAANDKVRERGHDRISVHGIVSGDEVALLRPVSRALLVRDALETTEHGGLML
GPNARPILRGEEEVRILMPPKRERRTRNARNGADANPVGDPLFDALRACRRELAQEAGVP
PYVIFHDSTLREMAEQRPSSIREMSHISGIGQKKLDAWGDAFLAAIAPFL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgcggcccgacattcccacgcttctccacgatattttcggcttcaccagctttcgcggg
gtgcagcagcaggtggtcggccgcgtcatggcggggttgccgacgctggcgatcatgccg
accggcgcgggcaagtcgctctgctatcaactcccttcggctgcgctcgacggctgctgc
gtcgtcgtgtcgccgctgatcgcgctgatgcacgaccagttgcgcgcggccaacgccgtg
ggcctgcgcgccgccagcctgaccagcgtggacgccgactggcgcgagacgcaggaccgg
ttgcgcaatggcgatctcgacctgctctatgtcgcgcccgaacgcgccagtcaggaaaac
ttccgcaatctgctgcgcgccacgaaggtcgccctcttcgccatcgacgaagcccattgc
gtgtccgaatggggccatgatttccgtcccgactatcgcctgctgcgcccgttgctggac
gaatttcccgatgtcccgcgccttgccctgaccgcgaccgccgacgcgcacacgcgcacg
gacattctcgtccagctcggcatcccgcaagacggcctcatcatctccggcttcgaccgg
cccaatatccgctatgccgtccacccgcgcgacgggctgacgcgccagcttgccgatctc
gtcgccgccaatcccggtcccggcgtcgtctatgcccagacccgcgccgcgaccgaaaag
ctggccgaaacgctggggcggagcggccgcgccgtgcgcgcctatcatgccggcatggac
ccggcccagcgggccgccaatcaggccgccttcatcgccagcgaggatatggtgatggtc
gccaccgtcgccttcggcatgggcatcgacaagcccgacgtgcgcttcgtcgcccatgcc
ggcctgcccaagtcgatcgagggctattatcaggaatcgggccgcgccgggcgcgacggc
gaaccggcggtcgcgcatctcttctggggggcggaggatttcgcccgcgcccgtatgcgc
atcatggaactggagcagggccgccagcagggcgagcgcgcgcgcatcgccgcgctgggc
gcgctggtggaaaccgccacctgtaggcgggccatattgctgcgccatttcggcgaaagt
ccgccgccgacctgcggcaattgcgacaattgcctgaccccgcccgccagcgtcgacgcg
accgaaacggcgcgcaaatatctgtccgccgtctaccgcaccggccagagcttcggcagc
ggccatatcgaggcggtgctgaccggcgcggccaatgacaaggtgcgcgaacgcggccat
gaccggatttcggtccatggcatcgtgtcgggcgatgaagtcgcgctgctgcgccccgtc
tcgcgcgcgctgctggtgcgcgacgcgctggaaaccaccgaacatggcgggctgatgctt
ggccccaacgcccggccgatcctgcgcggcgaggaggaggtgcgcatcctgatgccgccc
aagcgcgaacgccgcacccgcaacgcccgcaacggcgcggatgccaatccggtcggcgat
ccgctgttcgacgcgctgcgcgcctgtcgtcgcgaactggcgcaggaggccggcgtgccg
ccctatgtcatcttccacgattcgaccctgcgcgaaatggccgagcagcgcccgtcgtcc
atccgcgaaatgagccatatcagcggtatcggccagaagaagctggacgcctggggcgac
gccttcctcgccgcgatcgcgccattcctctga
DBGET
integrated database retrieval system
