Sphingobium sp. CAP-1: GL174_10070
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Entry
GL174_10070 CDS
T10467
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
spca Sphingobium sp. CAP-1
Pathway
spca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GL174_10070 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spca03400
]
GL174_10070 (recF)
DNA repair and recombination proteins [BR:
spca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GL174_10070 (recF)
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_30
AAA_15
AAA_22
AAA_29
ABC_tran
SbcC_Walker_B
AAA_27
nSTAND3
NTPase_1
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QGP79292
UniProt:
A0A6I5YLY4
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Position
MIN1:complement(2093724..2094794)
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AA seq
356 aa
AA seq
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MIGRLTLSDFRNHADALILPDHAFILLTGDNGAGKTNILEAVSMLAPGRGLRGASLSAMA
RQGGPGGFGIAAEVDGVVLGTGVTAASPDRRQVRIGGVASSANALADHLSIVWLTPAMDR
LFLDSPGGRRRFLDRLTLALHPGHAAHSARYDAAMRARNRLLIDVRRADPVWLTALEAQM
GEHGAALGDARADLVARLNAALSGQPDEPFARPQLAIEGEEGGDEPLGLRLARARRRDAA
AGRTLSGPHRHDLAVTHIAKGQAAALCSTGEQKALLLSILLAHAGLVAVDRGQPPVLLLD
EVAAHLDPSRRSALFQRLRETGGQVWMTGTESSLFNDLDDATRLTVTAGHVFRSAA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgatcggccgcctgaccctgagcgatttccgcaatcatgcggatgcgctgatcctgccc
gatcatgccttcatcctgctgaccggcgacaatggcgcgggcaagaccaacattcttgaa
gccgtgtcgatgctcgcccccggacgcgggctgcgcggcgcgtcgctgtcggcgatggcg
cggcagggtggaccgggtggcttcggcatcgcggcggaggtggatggcgtggtgctgggc
accggcgtcaccgccgccagccccgaccggcgacaggtgcggatcggcggggtcgcctcg
tccgccaatgcgctggccgatcatctgtcgatcgtctggttgaccccggcgatggatcgg
ctgttcctcgacagccccggcgggcggcggcgctttctcgaccggctgaccctggcgctg
catccgggccacgccgcgcacagcgcgcgctatgacgccgcgatgcgcgctcgcaaccgg
ctgctgatcgatgtgcggcgcgccgatccggtctggctgaccgcgctggaggcgcagatg
ggcgagcatggcgcggcgctgggcgatgcgcgcgccgatctcgtcgcccggctgaatgcc
gcgctgtcaggccagcccgacgagcccttcgcccggccgcaactcgcgatcgagggcgag
gaggggggcgacgaaccgcttggccttcgcctggcgcgcgcgcggcggcgcgatgcggcg
gcggggcgcaccctgtccggcccgcatcgccatgacctggccgtcactcatatcgccaag
ggacaggcggcggcgctttgttcgaccggcgagcagaaggcgctgctgctctcgatcctg
ctggcccatgccgggctggtggcggtcgatcggggccagccgccggtgctgctgctcgat
gaagtggcggcccatctcgacccgtcgcgccgcagcgcgctattccaacgtttgcgggaa
acgggcgggcaggtctggatgacgggcaccgaatccagtcttttcaatgatctggatgat
gcgacacggctaactgtaacggccggccatgtttttcgttccgcagcataa
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