Sphingobium sp. CAP-1: GL174_12910
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Entry
GL174_12910 CDS
T10467
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spca Sphingobium sp. CAP-1
Brite
KEGG Orthology (KO) [BR:
spca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spca02000
]
GL174_12910
Transporters [BR:
spca02000
]
Other transporters
Pores ion channels [TC:
1
]
GL174_12910
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
QGP79778
LinkDB
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Position
MIN1:2700724..2703078
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AA seq
784 aa
AA seq
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MKARHSIRILALASAAWSGAFALPAIAQTAATPVAEEEGAIVVTARRREETLVSVPIAVS
AFSGEALERGGAIDISDLANVTPNTTLEASRGTNSTLTAFIRGVGQQDPVSGFEQGVGIY
LDDVYLNRPQGALLDIYDVERIEVLRGPQGTLYGRNTIGGAVKYVTKMLPQDFALKIKGT
YGSYDQADGIVSVSAPISDLIRVGGAVARLSRGGFGKNLTTGEDNYNKDIWAGRATFEMG
GYGEPVLVRITGDYSKDNSNARGGHRLIPGQLSGAPVLGDVFDTRGGLTDPKQYVKSYGL
SMNVTAELTDALTLRSISAWRKDDSASPIDFDALPAVDVDVPAYYFNEQLSQEFQLLYEQ
GPFHGLLGLYYLDARADTAFDVRLFTTVAGLTAFTQADVDTETYAIFGDFTFDISDQLSL
SAGGRYTWDERRADILRQNYLGGGSPVFDGAGIPFGAPSTNFRGSAKYKKFTPRFSVSYK
PTPDHNVYASYSKGFKGGGFDPRGVGTNAPDLNGDGIRQDSEIADFLSFAPEEVDSYEVG
YKGNFMNGALYVAVAGFYADYKDVQIPGSVACTVSVGGVPTPSFCGVVSNAGKARFKGLE
FESNARLGRDLINSGDRLNLATAIGYIDAEYKEYITNIGGVPTDVAAHRRVQNTPKWTAS
GTLSYSTPLGDGSLYLGSTASWRSKTYQFEIPNPYIDQKGYALWDASIVYTAPDDRWSLG
LHGKNLLDKEYKTSGYTFVAANATTGAIINNAAGYPTPSLGKEGTLTAFYGNPRQVFLTG
TVKF
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcccgtcacagcatccgcatattggccctggcttccgccgcctggagcggtgcg
ttcgctttgcccgcgatcgcgcagaccgccgcgaccccggttgccgaggaagaaggcgcg
atcgtcgtcaccgcccgccggcgcgaagaaacgctggtcagcgtaccgatcgcggtcagc
gccttttccggcgaggcgctggaacggggcggcgcgatcgacatcagcgatctggccaat
gtgacccccaacaccacgctggaagcgtcgcgcggcaccaattcgacgctgaccgccttc
atccgcggcgtgggtcagcaagacccggtgtcgggtttcgaacagggcgtcggcatctat
ctggacgatgtctatctcaaccggccgcagggcgcgctgctcgacatttatgatgtggag
cggatcgaggtgctgcgcgggccgcaggggacgctctatggccgcaacacgatcggcggc
gcggtcaaatatgtgaccaagatgctgccgcaggatttcgcgctcaagatcaagggcacc
tatggcagctatgatcaggccgacggcatcgtcagcgtgtcggcgccgatcagcgacctg
atccgggtcggcggtgctgtcgcgcggctgtcgcgcggcgggttcggcaagaacctcacc
actggcgaggataattacaacaaggatatctgggctggtcgcgccacgttcgagatgggc
ggctatggcgaaccggtgctggttcgcatcaccggcgactatagcaaggacaatagcaac
gcgcgcggcgggcatcggctgatccccggccagttgtcgggcgcgccggtgctgggcgat
gtgttcgacacgcgcggcggcctgaccgacccgaagcaatatgtgaagtcctacggcctg
tcgatgaatgtcacggcggaactgaccgacgcgctgacgctgcggtcgatcagcgcctgg
cgcaaggatgacagcgcgtcgccgatcgatttcgacgcgctgcccgcggtcgatgtcgat
gtgccggcctattatttcaacgaacagttgagccaggaattccagttgctctacgaacag
gggccgttccatggcctgctgggcctctattatctggatgcgcgggcggacacggcgttc
gacgtaaggctgttcaccacggttgcggggctgaccgccttcacccaggcggatgtcgat
accgaaacctatgcgatcttcggcgacttcaccttcgacatcagcgaccagttgagcctg
tcggcgggtggccgctatacctgggacgagcggcgggcggatatcctgcggcaaaattat
ctgggcggcggatcgccggtgttcgacggcgcgggcatcccgttcggcgcgccgagcacc
aatttccgggggtcggccaaatataagaaattcacgccgcgcttctcggtcagctacaag
ccgacgccagaccataatgtctatgccagctattccaagggcttcaagggtggcggcttc
gacccgcgcggggtcggcaccaatgcgccggacctgaatggcgacggcataaggcaggat
agcgagattgccgatttcctgagcttcgcgcccgaagaggtcgacagctatgaggtcggc
tacaagggcaatttcatgaacggcgcgctctatgtggcggtcgccggcttctatgccgat
tataaggatgtgcagattccggggtcggtcgcctgcaccgtcagcgtcggcggcgtgccg
acgccctctttctgcggtgtggtgtccaatgccggcaaggcgcggttcaaggggctggag
tttgagagcaacgcccgccttggccgcgatctcatcaacagcggcgaccggctgaacctg
gccactgcgatcggttatatcgacgcggaatataaggaatatatcaccaatatcggtggt
gtgccgaccgatgtggcggcgcatcgccgggtgcagaacacgcccaaatggaccgcgagc
gggacgttgagctattcgaccccgctgggcgatggcagcctctatctgggcagcaccgca
tcctggcgcagcaagacctatcagttcgaaatccccaacccctatatcgaccagaagggc
tatgcgctgtgggatgccagcatcgtctataccgcgcctgacgatcggtggagcctgggg
ctgcacggcaagaatctgctcgacaaggaatataagacatcgggctataccttcgtcgcg
gccaatgcgacgaccggagcgatcatcaacaatgcggccggatacccgacgccgtcgctg
ggcaaggaaggcacgctgaccgccttctacggcaatccgcggcaggtgttcctgacgggg
acggtgaagttctga
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