Sphingobium sp. CAP-1: GL174_15480
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Entry
GL174_15480 CDS
T10467
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spca Sphingobium sp. CAP-1
Brite
KEGG Orthology (KO) [BR:
spca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spca02000
]
GL174_15480
Transporters [BR:
spca02000
]
Other transporters
Pores ion channels [TC:
1
]
GL174_15480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
MipA
Motif
Other DBs
NCBI-ProteinID:
QGP80526
LinkDB
All DBs
Position
MIN2:complement(228647..230917)
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AA seq
756 aa
AA seq
DB search
MSRLAFAATSLAILASPAAALAQASPDASAPGLAEGSDIVVTARRREERLQDVPIAVSAV
DASSLNSRGLDNVTQVSQIAPNIQFTPGQGGNSGGIAPFIRGVGENDFIITSDPAVGVYI
DGVYVARTFGATTELLGIDRIEVLRGPQGTLFGKNTVGGAINIVSAIPGRQQKVEADLRY
GSFNTVRARVYAETPLSDQWSLGVAALGEFGEGWQKIPSGDNLGNRNVIAGKMALHYDGE
GLDAVLQVDGLHRRQHSAPHSMIAFSPTFFSILQSTFLAPCCTVPGDIDRTDSTPALNKD
QTDAFNASLTLTRELGGATLKSITAYRYVDALFGRDGDASAAVNYAGDIHDEKARQYSQE
LQLSLDLGGRGALLLGAFAYREKTRDNTSLIVADGLYPALVAAGLDPFPVAPGFSIPASS
LDFNIDFRNRQRTDNLALFANGNYELTGGLSLELGARYTWEKKKFFQSAMRVYANEPLLA
GTPSYTLEKSWDAFTPRASLSYKVRPNLMTYASFSKGFRSGGFNGRPTSLEEIGSYDPEH
LTAYEAGVKAGFGRIATINLAVFRNEYRDQQILVSTVSPTSGLIVVRNENAGRSRIQGIE
LEGNFRVTPRFTLTSALGLLDARYLDYVSVINGVPTDVSDRKLKQAPDITANASAVYQAP
LGDAVEGVFRVDVAYKSEVYVDAENTPLLRQPDHAIVNASAELRFADSGLSIRGGVDNIT
NRRIITAGYDATTSFGFTEAYYSPPRRYSITLAWRH
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtttagcttttgctgccacgtcgctcgccatattggcatcacccgccgcggca
ctggcgcaggccagtccagacgccagcgcgcccggccttgcggagggcagcgatatcgtc
gtgaccgcccgtcgccgcgaggaacggttgcaggatgtaccgatcgccgtcagcgccgtc
gatgcgtcgtcgctcaacagccgtggcctcgacaatgtgacgcaggtcagccagatcgcc
cccaatatccagttcacgcccggtcagggcggcaacagcggcggcatcgcgcctttcatc
cgcggtgtgggcgaaaacgacttcatcatcacgtccgacccggcggtcggagtctatatc
gacggcgtctatgtcgcgcgtacgttcggcgcgacgaccgaattgctgggcatcgaccgg
atcgaggttctgcgcgggccgcagggcacgctgttcggaaagaacaccgtcggcggcgcg
atcaacatcgtctcggccatccccggacgccagcagaaggtcgaggcggacctacgctat
ggatcgttcaacaccgtgcgtgcgcgcgtctatgccgaaacgcccttgtcggaccaatgg
tcactgggcgtcgccgcgcttggcgaattcggcgagggctggcagaaaatcccgtccggc
gacaatctgggcaaccgcaacgtcatcgcgggcaagatggcgctgcattatgatggcgaa
ggcctggacgcggtgttgcaggtcgatggcctgcaccgccgccagcacagcgcgccgcac
agcatgatcgcctttagcccgaccttcttctcgatcctgcaatccaccttccttgcgccc
tgctgcacggtgccgggggatatcgaccgcaccgacagcaccccggcgctgaacaaggac
cagaccgacgccttcaacgcatcactgacgctgaccagggaactgggcggcgcaacgcta
aaatcgatcaccgcctatcgctatgtcgacgcgctgttcggtcgagatggcgatgcttcg
gcagcggtcaattatgccggcgacatccatgacgagaaagcccgtcaatatagccaggaa
ctgcaactctcgctcgacctgggcggacgcggcgcgctgctgctgggcgccttcgcctat
cgggaaaagacgcgcgacaataccagcctgatcgtcgcggacggcctgtacccggcgctg
gtcgccgcagggcttgatcccttcccggtggcaccgggcttttcgatcccggcctcctcg
ctcgatttcaatatcgatttccgcaaccggcagcggaccgacaatctggcgctgttcgcc
aacggcaactacgagctgacaggtggcctgtcgctggaattgggcgcgcgttacacatgg
gagaagaagaagttcttccagtccgcgatgcgggtctatgccaacgaaccgttgctggcc
ggaacgcccagctacacgctggagaaaagctgggacgccttcacgccccgcgcatccctg
tcctacaaagtcaggccgaacctgatgacctatgcctctttttccaagggcttccggtcc
ggcgggtttaacggccgcccgacatcgctggaggaaatcgggtcttatgatcctgaacat
ctgaccgcctatgaagcaggcgtcaaagccggcttcggccggatcgcgacgatcaatctt
gctgtgttccgcaacgaatatcgcgaccagcagatcctggtttcaaccgtcagccccacc
agcggcctgatcgtcgtccgcaacgaaaatgccggccggtcgcgcattcagggcatcgaa
ctggagggtaatttccgcgtcaccccacgcttcaccctgaccagcgccctgggcctgctc
gatgcccgatatctggactatgtctcggtcatcaacggcgtgccgaccgacgtgagcgac
cgcaagctgaagcaagcgcccgacatcaccgccaacgcaagcgcggtctatcaggcgccc
cttggcgatgcggtcgagggtgtgtttcgtgtcgatgtagcctataagagcgaggtctat
gtcgatgccgaaaacacccccctgctgcgacagcccgaccatgccatcgtcaatgccagt
gccgaactgcgctttgccgacagcggcctgtcgatacgcggcggggtcgacaatatcacc
aaccggcggatcatcacggccggctatgatgccacgaccagcttcggcttcacggaagcc
tattattcgccgccgcggcgctacagcatcacgctggcctggcggcactaa
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