Sphingobium sp. CAP-1: GL174_17085
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Entry
GL174_17085 CDS
T10467
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
spca Sphingobium sp. CAP-1
Pathway
spca03420
Nucleotide excision repair
spca03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GL174_17085
03430 Mismatch repair
GL174_17085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spca03400
]
GL174_17085
Enzymes [BR:
spca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GL174_17085
DNA repair and recombination proteins [BR:
spca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GL174_17085
MMR (mismatch excision repair)
Other MMR factors
GL174_17085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_11
DUF3553
REP_ORF2-G2P
Motif
Other DBs
NCBI-ProteinID:
QGP80802
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All DBs
Position
MIN2:590014..592290
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AA seq
758 aa
AA seq
DB search
MTLPAPSPNDPPYLQGLNEPQREAVLTTEGPVLVLAGAGTGKTAALTARLAHLIGTRRAW
PSEILAVTFTNKAAREMRARVGGMIGDAVEGMPWLGTFHAIAAKMLRRHAELVGLQSNFT
ILDTDDQLRLMKQLIQAEGIDEKRWPARQLGGLIDQWKNKGWTPEDVGAGESEGYAHGKG
QKLYAAYQARLRDVNACDFGDLLLHVLTILKKHRDVLEQYQQKFRYIMVDEYQDTNSSQY
LWLRLLAQTRKNICCVGDDDQSIYSWRGAEVANILRFEKDFPGATIIRLEQNYRSTPHIL
GAASGVIAENGNRLGKTLWTDIDVGEKVRVVGVWDGPEEARRVGEEIEGIERSGGSLDEV
AILVRAQHQTREFEDRFIQIGLPYRIVGGFRFYERAEIRDALAYLRLVNQPADDLAFERI
VNVPKRGLGDKAVEKLHRLARAEGIPLTLAAARILDTDELTPQARRSLGSFVGDLARWRD
RAAQLPHAELARQILDESGYTAMLQAERTTESAGRLENLSELARAMEEYETLGAFLEHVS
LVMDNEAQADERKVTIMTIHAAKGLEFDTTFLVGWEEGVFPSQRALDEGGQNSLEEERRL
AYVAITRARRRCTILHAANRRIYGQWTSSIPSRFVGELPPEHVAEESSMSGGASLWRANW
SERDDPFANVARGSGRGPGWQRAQSSGQFSREPVRIVEARTSAVSLGNKGRSDMKVGLRV
FHQKFGYGTVAEIEGNKLEIDFETAGRKRVMDSFVSLV
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgccagccccctcccccaacgacccgccctatctgcaagggctgaatgaaccg
cagcgggaggccgtgctgacgaccgaggggccggtgctggtgctggccggtgcggggacg
ggcaagacggcggcactgaccgcgcgactcgcccatctgatcggcacgcgccgtgcctgg
ccgtcggaaatcctggccgtgaccttcaccaacaaggccgcgcgggagatgcgcgcccgc
gtcggcgggatgatcggcgacgcggtggaggggatgccctggctcggcaccttccacgcg
atcgcggcgaagatgttgcgccgccatgccgaactggtcgggctgcaatccaatttcacc
atcctcgacaccgacgaccagttgcggctgatgaagcaattgatccaggcggaagggatc
gatgagaagcgctggccggcgcggcaactgggcgggctgatcgaccagtggaagaataag
ggctggacgccggaggatgtcggcgcgggcgagagcgaaggctatgcccatggcaagggg
cagaagctctatgccgcctatcaggcgcgactgcgcgacgtgaacgcctgcgactttggc
gacctgctgctgcacgtcctgacgatattgaaaaagcatcgcgatgtgctggagcaatat
cagcagaaattccgctatatcatggtggacgaatatcaggacaccaatagcagccaatat
ctgtggctgcggcttttggcccagacgcgcaagaatatttgctgcgtgggcgatgatgac
cagtccatctattcatggcgcggcgctgaagtcgccaatatcctgcgcttcgagaaggat
tttccgggcgcgaccatcatccggctggagcagaattatcgttccacgccccatatcctg
ggcgcggcgtcgggcgtgatcgccgaaaatggcaatcggctgggcaagactttgtggacc
gacatcgatgtcggcgagaaggtgcgcgtggtcggcgtgtgggatgggccggaagaggcc
cggcgcgtcggcgaggagatagaggggatcgagcggagcggcggatcgctagacgaggtg
gcgatccttgtccgcgcccagcaccagacccgcgagttcgaggaccgcttcatccagatc
ggcctgccctatcgcatcgtcggcggtttccgcttctatgagcgcgccgaaatccgcgat
gcgctggcctatctgcggctggtcaaccagcccgccgacgatctggcgttcgagcggatc
gtcaatgtccccaaacgcggccttggcgacaaggcggtagaaaagctgcaccggctggcg
cgggcggagggcatccctctcaccctcgccgccgcgcgcatcctcgacaccgacgaactc
acgccgcaggcgcggcggtcgctgggcagcttcgtgggcgatctggcgcgctggcgcgac
cgggcggcgcaactgccccatgccgaactggcgcgacagatattggacgaaagcggctat
accgcgatgttgcaggccgagcgcacgaccgaaagcgcgggtcgactggaaaacctgtcc
gaactggcccgcgcgatggaggaatatgagacgctgggcgcgtttctggagcatgtcagc
ctcgtcatggacaatgaggcgcaggccgacgagcgcaaggtcacgatcatgaccatccac
gccgccaaggggctggagttcgacacgacattcctagtcgggtgggaggaaggcgtcttt
ccatcgcagcgggcgctggacgaaggcgggcagaacagcctggaggaggaaaggcggctc
gcctatgtggcgatcacgcgggcgcgcaggcgctgcactatcctccacgccgccaaccgc
cgcatctatggccagtggaccagcagcatcccgtcgcgattcgtcggcgaattgccgccc
gaacatgtcgcagaagaaagcagcatgagcggcggcgcgtcgctgtggcgggccaactgg
tcggaacgggacgatcccttcgccaatgtcgcgcgcggatcaggacgcgggccgggctgg
caacgggcgcaatcgtccggccaattcagccgcgagccggtgcgaatcgtcgaggcgcga
acgtcggccgtgtcgctgggtaacaaggggcgcagcgacatgaaggtcggcctgcgcgtg
ttccatcagaaattcggttacggcaccgtcgcggaaatcgagggcaacaagctggagatc
gatttcgagacggcgggccgcaagcgggtgatggacagcttcgtgtcgctggtgtga
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