Sphingobium sp. CAP-1: GL174_18615
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Entry
GL174_18615 CDS
T10467
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K24073
RNA polymerase sigma factor CnrH
Organism
spca Sphingobium sp. CAP-1
Brite
KEGG Orthology (KO) [BR:
spca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spca03021
]
GL174_18615
Transcription machinery [BR:
spca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GL174_18615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
PhyR_sigma-like
HTH_23
Sigma70_ECF
HTH_28
DUF134
DUF802
DUF6456
Xre-like-HTH
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
QGP81066
LinkDB
All DBs
Position
MIN2:complement(932152..932715)
Genome browser
AA seq
187 aa
AA seq
DB search
MNQPDPDPDDRALAARALAGQQSAYAALMQRHRDAVYRIIRGHIGDGDEALDITQETFVA
AFAALARYDDARPFRIWIARIALNKCRDWARRRAVRRFFAFARPIDDALDIADSAATPEE
ALGSQHALARINAAIAALPANLKDVLLLRTIEQMSQAEAAQVLGVTEKAVETRLYRARAK
LTEILRD
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccagcccgaccccgatcctgacgaccgggcgctcgccgcccgcgcgctggcgggg
cagcaatcggcctatgccgcgctgatgcagcggcaccgcgatgccgtctaccgcatcatc
cgcggccatatcggcgatggcgacgaagcgctcgacatcacgcaggagacgttcgtcgcc
gctttcgccgcgctcgcccgctatgacgatgcacggcccttccgcatctggatcgcccgc
atcgcgctcaacaaatgccgcgactgggcgcgccgccgcgccgtccgccgcttcttcgcc
ttcgcccggccgatcgacgacgcgctcgacatcgccgacagcgcggccacgccggaggaa
gcgctcggctcgcagcacgcgcttgcccgcatcaacgccgccatcgcggcgctccccgcc
aatctcaaggacgtattgctgctccgcaccatcgagcagatgagccaggccgaagcggcg
caggtgctgggcgtgaccgagaaagcggtcgaaacccgcctctaccgcgcccgcgccaaa
ctcacggaaattttgagggattag
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