Sphingobium sp. CAP-1: GL174_21455
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Entry
GL174_21455 CDS
T10467
Symbol
soxR
Name
(GenBank) redox-sensitive transcriptional activator SoxR
KO
K13639
MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
Organism
spca Sphingobium sp. CAP-1
Brite
KEGG Orthology (KO) [BR:
spca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spca03000
]
GL174_21455 (soxR)
Transcription factors [BR:
spca03000
]
Prokaryotic type
Helix-turn-helix
MerR family
GL174_21455 (soxR)
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Gene cluster
GFIT
Motif
Pfam:
MerR_1
MerR-DNA-bind
MerR
HTH_IclR
HTH_17
TetR_N
Motif
Other DBs
NCBI-ProteinID:
QGP81661
LinkDB
All DBs
Position
p3:153009..153578
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AA seq
189 aa
AA seq
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MTVDKTRPLSVGAIAQRSGVAVSTIHFYEAKGLIKGERTAGNQRRYPRSVLRRIAIIRTA
QYVGLSLSELKDFLDRIPEGPVTSTDWRRLSAEWSTLLNERIASLMRLRDRLETCIGCGC
MSLTDCPLRNPEDRLGAVGSGPQLLLVNFAREPRDDEDSPVHFRTKRRSLAAVKSTLDVN
QDTKGNDDS
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgactgttgacaaaacacgtcctctatctgttggcgccatcgcgcaacgtagcggagtc
gcggtttcgacgatccatttctacgaggcgaaaggcctcatcaagggcgagcgcacagcc
ggcaatcaaaggcggtatcctcgatccgtattgagacggatcgccattatcagaaccgcc
caatatgtcgggctttcgctctccgaactaaaggattttcttgaccggattccagagggg
ccggttacgtcaacggattggcgtcggctcagtgccgagtggagtacgctattgaacgag
cggatagctagtctcatgaggctgcgtgaccgcctcgaaacctgcattggatgcggctgt
atgtccctcaccgactgccccttgcgaaaccccgaagacaggttgggcgcagttgggtca
ggccctcagctcctcttggtgaatttcgctcgtgaacctcgtgatgatgaagatagcccc
gttcattttcgcaccaaacgtcgctccttggcggcggtcaaatccactcttgacgttaac
caagacacaaaagggaacgatgactcatag
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