Sphingomonas sp. CL5.1: F9288_00050
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Entry
F9288_00050 CDS
T11042
Name
(Genbank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
spcl Sphingomonas sp. CL5.1
Pathway
spcl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
F9288_00050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spcl03400
]
F9288_00050
Enzymes [BR:
spcl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
F9288_00050
DNA repair and recombination proteins [BR:
spcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
F9288_00050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
CDH1_2_SANT_HL1
Motif
Other DBs
NCBI-ProteinID:
QKR98225
UniProt:
A0A6N0WUH4
LinkDB
All DBs
Position
9587..9838
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AA seq
83 aa
AA seq
DB search
MASTPDEDAIAAMTFEAALRELEAIVHKLESGETPLAEAIDLYERGNALRARCAERLDAA
QARIEAIRLDAEGRATTTPFSAG
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgacccccgatgaagatgcgatcgccgcgatgacgttcgaggcggcgctgcgc
gagctggaagcgatcgtccacaagctcgaatccggcgagacgccgctcgccgaggcgatc
gacctctacgagcgcggcaatgcgctgcgcgcgcgctgcgccgaacggctggacgcggcg
caggcgcggatcgaggcgatccggctcgatgcggaaggtcgcgcgaccaccacgccgttc
agcgcgggatga
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