Sphingomonas sp. CL5.1: F9288_01415
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Entry
F9288_01415 CDS
T11042
Symbol
pcaH
Name
(Genbank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
spcl Sphingomonas sp. CL5.1
Pathway
spcl00362
Benzoate degradation
spcl00624
Polycyclic aromatic hydrocarbon degradation
spcl01100
Metabolic pathways
spcl01120
Microbial metabolism in diverse environments
spcl01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
spcl00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
F9288_01415 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
F9288_01415 (pcaH)
Enzymes [BR:
spcl01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
F9288_01415 (pcaH)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
DUF4198
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
QKR98449
UniProt:
A0A6N0WWP4
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Position
complement(302200..302913)
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AA seq
237 aa
AA seq
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MTTDIAYAPDDAGLPPLLYPEYRSTGLRSPRHPLVNAPQTLTEVSGPSGCWSALMGQAEV
DLTSQHGSAPHGQRIRISGRVLDDSGRPVPNTIVEIWQANAAGRYIHRNDNWDAPLDPNF
TGAGRVITDDQGWYSFTTIRPGAYPWGNHHNAWRPAHIHLSLLGPAFATRLVTQIYFPDD
PLIEIDPIANAVPMPYRNRLICRFDIDTTIANWALGYRFDIVLKGAMQTPFEGTANG
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
gtgacaacggacatcgcatatgcgcctgacgacgcgggcttgccaccactcctctaccca
gagtatcgctcgaccggattgcgtagtccgcgtcaccccttggtcaacgctccgcagact
ttgactgaggtgagcggccccagcggttgctggagcgctcttatgggtcaagccgaggta
gacctaacgtcgcaacatggatctgctccccatggccagcgcatccgcatctctggcagg
gtgctggatgacagtggtcgtccggtaccaaacaccatcgtcgaaatctggcaggcgaac
gcggccgggcggtatatccatcgcaacgataattgggacgcgccgctcgatccgaacttc
accggagctggtcgggtgattaccgatgatcagggctggtattccttcacgaccatccgg
cccggagcttacccttggggtaaccatcacaatgcatggcgcccggctcatattcacctg
tcgttgcttggccccgccttcgccactcgtctcgtcacccaaatctactttcctgacgat
ccattgatcgagatcgatccgatcgcgaatgcggttccgatgccgtatcgcaatcgcctc
atctgccggtttgatatcgacacgaccatcgccaactgggcgctcggataccgttttgac
atcgtgctgaagggggcaatgcagacgcccttcgagggtactgccaatggataa
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