Sphingomonas sp. CL5.1: F9288_01820
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Entry
F9288_01820 CDS
T11042
Name
(Genbank) MBL fold metallo-hydrolase
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
spcl Sphingomonas sp. CL5.1
Brite
KEGG Orthology (KO) [BR:
spcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spcl03016
]
F9288_01820
Enzymes [BR:
spcl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
F9288_01820
Transfer RNA biogenesis [BR:
spcl03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
F9288_01820
Prokaryotic type
F9288_01820
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
QKR98519
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All DBs
Position
384925..386013
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AA seq
362 aa
AA seq
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MRHAIWWATGGAALTALLAVAAFPGAIGREAARIAIDARAGVDVTRELPDGLHVALCGTG
SPMPDPTRAGPCSVVIAGRHVFVVDAGEGGARNIMLMGIPNGRIERVFLTHLHSDHIDGL
GPMLLFAWTGAGRTRPLPVHGPAGTERVVAGFDQAYAIDAGFRTAHHGPIVAPPSGAGGA
AVPFALPPKGDWSPVPVYAGDGITVTAFRVDHGPVEPAVGYRFTYKGRSLVFSGDTSPTP
SIVRNARGADLLVHEGLQPRLVGLMTEVLEQRGQTALTQITRDILNYHTSPEDAAAEAQA
AGVKHLVFSHNIPQMPSRVMYPAFLGDARQRFDGTITVGEDGMVFSLPAGGTGMELRRWS
VR
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgcggcacgcgatatggtgggcgacgggcggcgcggcgctgacggcgctgctcgcggtg
gcggcgtttccgggggcgatcgggcgcgaggcggcgcggatcgcgatcgacgcgcgcgcg
ggggtggacgtcacgcgcgaactgccggacggactgcacgtcgcgctgtgcggcaccggc
tcgccgatgcccgatccgacccgcgccgggccgtgcagcgtggtgatcgcgggccggcat
gtcttcgtcgtcgacgcaggcgagggcggcgcgcgcaacatcatgctgatgggcatcccc
aatggccgcatcgagcgcgttttcctgacgcatctccattccgaccatatcgacgggctg
gggccgatgctgctgttcgcctggaccggcgcggggcggacgcggccgctgcccgtccac
ggcccggcggggaccgagcgggtcgtcgccggattcgatcaggcctatgcgatcgacgcc
ggcttccgcaccgcgcaccacggcccgatcgtcgcgccgccgtccggcgccggcggggcg
gcggtgcccttcgcgctgccgccgaaaggggactggtcgccggtgccggtctatgccggc
gacggcatcaccgtcaccgccttccgcgtcgatcacggcccggtcgagccggcggtcggc
tatcgcttcacctacaaggggcggtcgctcgtgttcagcggcgacaccagcccgacgccc
tcgatcgtgcgcaacgcgcgcggcgcggatctgctggtgcacgaagggctgcaaccccgg
ctcgtcggtctgatgaccgaagtgctggaacagcgcgggcagaccgcactcacccagatc
acgcgcgacatcctcaactaccacacctcgcctgaggacgccgccgccgaggcgcaggcg
gccggggtgaagcatctcgtgttcagccacaacatcccgcagatgccctcgcgggtgatg
tatcccgccttcctcggcgatgcgcggcaacggttcgacgggacgatcacggtgggcgag
gacgggatggtgttcagccttcccgccggcggcaccgggatggagctgcgccgctggtcc
gtgcgatag
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